Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele37g1370 ATGGCTCTTGCATGTTTCAAACTTCCTTCGTTTTCTCCTTCGGCCATTGCTGGGGATGGTCTCAGAAGAAGCTACACTTCTCTGCGTTCTTCTTCTTCTTCTTCACTCTGTCTTGAGAATATCAGGGGAAGCAGAAGAAATTTCATGGTCAATGCATCACCTGAGCTGAATTCTGCATCCACAGCCGTTATTTTCGGACCGTTTGAGGAGATCAAGAAGGACGTCCTTACTGTTCCCAGTGCTCCTCAAGTTTCTTTGGCTCGTCACAACTACCAAGATGAGTGTGAAGCTGCCATTAACGAGCAGATCAATGTGGAATACAACGTTTCCTATGTGTACCACTCCATGTTTGCGTACTTTGACAGAGACAACATTGCTCTCAAGGGTTTTTTCAAGGAATCAAGTGAAGAAGAAAGAGAGCATGCTGAGAAACTTGTGAAATATCAGAACGATCGTGGTGGACGAGTGGTGCTTCACCCCATCCAGAATCCCCCCTCGGATTTTGAGCATGCTGAAATGGGAGATGCATTGTATGCTATGGAATTAGCTTTGTCTTTGGAGAAGTTAACAAACGAAAAACTACTGAATGTGTACAGCGTTGCGGACCACAACAATGATCCTGAATTGGCTCACTTCATTCAGAGCGAGTTTCTCTCTGAGCAGGTAGAAGCAATCGAGGAGATAGCAAAGTATGTGGCTCAATTGAGAATGGTTGGGAAGGGTCACGGCGCTTGGCACTTTGATAAATGTCTTCGTTATCATGCGTGA 768 0.4492 MALACFKLPSFSPSAIAGDGLRRSYTSLRSSSSSSLCLENIRGSRRNFMVNASPELNSASTAVIFGPFEEIKKDVLTVPSAPQVSLARHNYQDECEAAINEQINVEYNVSYVYHSMFAYFDRDNIALKGFFKESSEEEREHAEKLVKYQNDRGGRVVLHPIQNPPSDFEHAEMGDALYAMELALSLEKLTNEKLLNVYSVADHNNDPELAHFIQSEFLSEQVEAIEEIAKYVAQLRMVGKGHGAWHFDKCLRYHA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele37g1370 255 CDD Euk_Ferritin 93 249 - -
Lele37g1370 255 Pfam Ferritin-like domain 97 238 IPR008331 GO:0008199
Lele37g1370 255 ProSiteProfiles Ferritin-like diiron domain profile. 89 239 IPR009040 -
Lele37g1370 255 FunFam Ferritin 58 255 - -
Lele37g1370 255 Gene3D - 58 253 IPR012347 -
Lele37g1370 255 ProSitePatterns Ferritin iron-binding regions signature 1. 137 155 IPR014034 -
Lele37g1370 255 SUPERFAMILY Ferritin-like 81 251 IPR009078 -
Lele37g1370 255 PANTHER FERRITIN 71 251 IPR001519 GO:0006826|GO:0006879|GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele37g1370 Lele-ChrLele37 22554865 22556469 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1174 43 20076876 20079843 Lele37g1370 37 22554865 22556469 CCT
Lele37g1370 37 22554865 22556469 Lele39g0052 39 373030 374718 hybridization
Lele37g1370 37 22554865 22556469 Lele40g1189 40 21818053 21820983 hybridization