Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1246 ATGACCAGTGCTGCAAAATTGAGGACACCCACGCATCTGCTGTCACAGAGCTACAGATTGGAAACCTCAAATGGCATTGTTGTAGCTGCAGTGGCCATTGGTGGTGGATTCAAAATGAATGATTGCATTTTGCTTGCTTTAACTGGAGGAATCCAGGAAGACAAAGAAAATGGATTATACCGCCTCGTCTCAGAAATGAGTCTTGCATGTCTCAAAATTTCTTCGTTTTCTCCTTCGGCGATTGCTGGGGATGGTCTCAGAAGAAACTCCACTTCTCTTCGTTCTTCTTCCTCACTCTGTCTTGCGAATATCCGAGGAAGCAGAAGAAATTTCATGGCCCATGCATCACCTGAGCTGAATTCTGCAGCCACAGCCGTTATTTTCGAACCGTTTGAGGAGATCAAGAAGGACGTCCTTACTGTTCCCATTGTTCCTAAAGTTTCTTTGGCTCGTCAGAACTACCAAGATGAGTGTGAAGCTGCCATTAACGAGCAGATCAACGTGGAATACAACGTTTCCTATGTGTACCACTCCATGTTTGCCTACTTTGACAGAGACAACATTGCTCTGAAGGGCTTTGCCAAGTTTTTCAAGGAATCAAGTGAAGAAGAAAGAGAGCATGCTGAGAAACTTATGAAATATCAGAACGATCGTGGTGGACGAGTGTTACTTCACCCCATCAAGAATCCCCCCTCGGATTTTGAGCATTATGAAAAGGGAGATGCATTGTATGCTATGGAATTAGCTTTGTCTTTGGAGAAGTTGACAAACGAGAAACTACTGAATTTGTACAGCGTTGCGGACCACAACAATGATCCTGAGTTGGCTCACTTCATTCAGAGCGAGTTTCTCTCTGAGCAGGTAGAAGCAATCGAGGAGATAGCAGAGTATGTGGCTCAATTGAGAATGGTTGGAAAGGGTCACGGCGTGTGGCACTTTGATCAATGTCTTCGTCATCATGCGTGA 966 0.4472 MTSAAKLRTPTHLLSQSYRLETSNGIVVAAVAIGGGFKMNDCILLALTGGIQEDKENGLYRLVSEMSLACLKISSFSPSAIAGDGLRRNSTSLRSSSSLCLANIRGSRRNFMAHASPELNSAATAVIFEPFEEIKKDVLTVPIVPKVSLARQNYQDECEAAINEQINVEYNVSYVYHSMFAYFDRDNIALKGFAKFFKESSEEEREHAEKLMKYQNDRGGRVLLHPIKNPPSDFEHYEKGDALYAMELALSLEKLTNEKLLNLYSVADHNNDPELAHFIQSEFLSEQVEAIEEIAEYVAQLRMVGKGHGVWHFDQCLRHHA 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1246 321 Pfam Ferritin-like domain 160 304 IPR008331 GO:0008199
Lele38g1246 321 PANTHER FERRITIN 134 319 IPR001519 GO:0006826|GO:0006879|GO:0008199
Lele38g1246 321 SUPERFAMILY Ferritin-like 146 318 IPR009078 -
Lele38g1246 321 CDD Euk_Ferritin 156 315 - -
Lele38g1246 321 ProSiteProfiles Ferritin-like diiron domain profile. 152 305 IPR009040 -
Lele38g1246 321 FunFam Ferritin 121 321 - -
Lele38g1246 321 Gene3D - 121 320 IPR012347 -
Lele38g1246 321 ProSitePatterns Ferritin iron-binding regions signature 1. 203 221 IPR014034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1246 Lele-ChrLele38 23316888 23319855 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele43g1174 43 20076876 20079843 Lele38g1246 38 23316888 23319855 CCT
Lele38g1246 38 23316888 23319855 Lele39g0052 39 373030 374718 hybridization
Lele38g1246 38 23316888 23319855 Lele40g1189 40 21818053 21820983 hybridization