Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0458 ATGGGTTTCTTGTGGTGGCTCAGAATGATGATCATCTACCATTTCTTTGCTGCAACACTCATCTCCTCGGATACTCCTTTGAGCTCAAGCAAACTCTCTCCGATGTCCTCCGAATTTTTTGATTTTGCCAAGAAGCCTGAGGTTTTTTATTGGATAGTCGGAAACAAAAGGAAGCTTCATGAGAATCCTGAATTTCTTTGTGAGGAATTTCAGACCAGTGAGCTCATCAGAAGAGAACTGGTGGAGGAGTGGGAGCACAAGAGTAAAGTTCCTGGAAAAATGCATGCTTGTGGCCATGATGCTCATGTTACTATGCTTCTTGGTGAAGTGGGTTCTAGATCTGGTCCTATTATGGCCGGAAGTGGCTTCTTTGAAGCAGTAATAAGTGGAAAGGGCGGTCATGCTGCTTTTCCTCAGCATTCTGTAGACCCCATATTGGCAGCTTCAAATGTGATTGTTAGCTTACAGCATCTTGTCCCTCGTGAGGCGATCCGACTCTTAGGAGAATTTGGGATAGGTTTACAGAAACAAATAGGAAGAGATAGGGGGAAACATGAAAGAGATGATGGGGGAGAGGAGAGACAGAACGTGGTGACAATAGCAAAATTCCAAGGAGTTGGTGCTTTCAATATTATTCCAGATTCTGTGACTATTGGTGGCACCTTCCGCTCATTTTCGAAAGTCAGTTTTATGCAACTAAAGCAGCGGATTGAGCAGATTACTGGGCTATTGTTTTGTTTTGCAATTCTACTAGGGTTTAAGGCTGATACATTTCTTCAGCATTTTCGACAAGTTGCAGGGGATATGCTTGGTGAAAAAAAGGTTAATAAAGTGAAGCCAATGATGGGAGCTGAGGACTCCTCATTCTATCAAGAGGTTATCCCTGGTTACTTTATTTTTCTTGGAATGGAGGATGTTTCTCTTGGACCACTTGAGTCGCTGCACTCAACTACTTTCGGAGTCAATGAAGATGTTCTTCCTTCTGGAGCTGCACTTCATGCGTCATTAGCTACTAGCTATCTCCTTCAATTTCAGCCGGATGCAAAAGTTGCAGAAGGGACTGATCGCGATGAACTATGA 1080 0.4333 MGFLWWLRMMIIYHFFAATLISSDTPLSSSKLSPMSSEFFDFAKKPEVFYWIVGNKRKLHENPEFLCEEFQTSELIRRELVEEWEHKSKVPGKMHACGHDAHVTMLLGEVGSRSGPIMAGSGFFEAVISGKGGHAAFPQHSVDPILAASNVIVSLQHLVPREAIRLLGEFGIGLQKQIGRDRGKHERDDGGEERQNVVTIAKFQGVGAFNIIPDSVTIGGTFRSFSKVSFMQLKQRIEQITGLLFCFAILLGFKADTFLQHFRQVAGDMLGEKKVNKVKPMMGAEDSSFYQEVIPGYFIFLGMEDVSLGPLESLHSTTFGVNEDVLPSGAALHASLATSYLLQFQPDAKVAEGTDRDEL 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0458 359 SUPERFAMILY Zn-dependent exopeptidases 51 342 - -
Lele43g0458 359 PANTHER PEPTIDASE M20 FAMILY MEMBER 257 349 IPR017439 GO:0016787
Lele43g0458 359 Gene3D - 119 243 - -
Lele43g0458 359 Pfam Peptidase dimerisation domain 120 240 IPR011650 -
Lele43g0458 359 SUPERFAMILY Bacterial exopeptidase dimerisation domain 120 241 IPR036264 -
Lele43g0458 359 Gene3D Zn peptidases 25 82 - -
Lele43g0458 359 Gene3D Zn peptidases 248 358 - -
Lele43g0458 359 Gene3D Zn peptidases 83 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0458 Lele-ChrLele43 4008747 4017243 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0311 38 2452109 2454078 Lele43g0458 43 4008747 4017243 CCT
Lele39g1096 39 19538646 19540582 Lele43g0458 43 4008747 4017243 CCT
Lele40g0290 40 2343480 2345422 Lele43g0458 43 4008747 4017243 CCT
Lele41g0940 41 18933199 18935754 Lele43g0458 43 4008747 4017243 hybridization
Lele42g0911 42 21860165 21863959 Lele43g0458 43 4008747 4017243 hybridization