Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0311 ATGTCTGGAATTATTGTGGTTTTCGACTTCGACAAGACCATTGTTGACTGCGATAGTGACAATTGGGTCGTCGACGAGCTCGGTTTCACAGACTTGTTCAACCAACTTCTTCCCACCATGCCTTGGAACTCTCTCATGGATAGGATGATGATGGAGCTTCATTCACAAGGAGTAACCATTGGGGAAATTGAAGAGGTTCTGAAGAGGATTCCTATTCATCCCAGAGTAGTTCCTGCCATTAAAGCAGCTCATGCTTTAGGGTGTGATTTAAGGGTTGTGAGTGATGCAAATATGTTCTTCATCGAGACAATTTTGAAGCATTTGGGAATAAAGGATTGCTTCTCTGAGATTAACACTAATCCTGGCTATGTTAATGGAGAAGGAAGGTTGAGGATTTTGCCTTATCATGACTTTAACAAAGCTCCCCATGGCTGTGGTCTCTGCCCTCCAAACATGTGCAAGGGTCTGATCATAGAGAGGATTCAAGATTCAATATCTCCTGAAGGAAGCAAGAGGTTCATCTATCTTGGTGATGGAGCTGGGGACTACTGTCCAAGCTTGAGGCTGAAAGAGAGGGATTGTGTGATGCCAAGGAAGAACTTTCCTGTGTGGGACTTGATATGCAAAGACCCTTTGCTTGTGAAGGCTAAAATCCATGAATGGAGGGATGGGGAAGATCTTGAGAGGGTTTTGATTCACTTGATCAACAAGATTTCTAAGGAAGAAGAAGAAGAAGCATCTCAGTTCATCTCACCTGATTGCAAGTTGCAGATTTTGTCCGTGTCTGCTCCTGAGTCTCGGCCTCGACCTCTCCGAGTTCAGCAGAGTACAATGAGATGGAGCGGGAGTGGGGGATGCGTTCAAATTTCGGGTCGGTGCGGCTGGAATCCATCATCGAAACGTTGGTCGTCACCGCATTGCCTGCTCCAAAGATTCCCTGGACCTCAAGCAAGACGGAGGAGTCCGACAATAATGCAGGGTTGTCGGCCAATTACTGTTCCGAAGATGTGTTTGGTTGTGAATATGCCTATTAAACTGTTCTCATTCATGGGGTGA 1056 0.4574 MSGIIVVFDFDKTIVDCDSDNWVVDELGFTDLFNQLLPTMPWNSLMDRMMMELHSQGVTIGEIEEVLKRIPIHPRVVPAIKAAHALGCDLRVVSDANMFFIETILKHLGIKDCFSEINTNPGYVNGEGRLRILPYHDFNKAPHGCGLCPPNMCKGLIIERIQDSISPEGSKRFIYLGDGAGDYCPSLRLKERDCVMPRKNFPVWDLICKDPLLVKAKIHEWRDGEDLERVLIHLINKISKEEEEEASQFISPDCKLQILSVSAPESRPRPLRVQQSTMRWSGSGGCVQISGRCGWNPSSKRWSSPHCLLQRFPGPQARRRSPTIMQGCRPITVPKMCLVVNMPIKLFSFMG 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0311 351 SUPERFAMILY HAD-like 4 197 IPR036412 -
Lele38g0311 351 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Lele38g0311 351 Gene3D - 2 188 IPR023214 -
Lele38g0311 351 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 243 IPR016965 GO:0016791
Lele38g0311 351 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 199 IPR006384 GO:0016791
Lele38g0311 351 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 6 187 - -
Lele38g0311 351 Coils Coil 224 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0311 Lele-ChrLele38 2452109 2454078 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0311 38 2452109 2454078 Lele41g0940 41 18933199 18935754 CCT
Lele38g0311 38 2452109 2454078 Lele42g0911 42 21860165 21863959 CCT
Lele38g0311 38 2452109 2454078 Lele43g0458 43 4008747 4017243 CCT
Lele38g0311 38 2452109 2454078 Lele44g0448 44 3347584 3351852 CCT
Lele38g0311 38 2452109 2454078 Lele39g1096 39 19538646 19540582 hybridization
Lele38g0311 38 2452109 2454078 Lele40g0290 40 2343480 2345422 hybridization