Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0770 ATGATGCTTCTCTACCTTTGTCTCCCTCTGCAACTCCTAACTTTCATGTTTTTTCCCCACCTCGCTCTATCTTTCTCGGCGATCATGTCAGATTCCGGCGTGCCTTCATCTCTTGTTGACGGTCCTCAGACCGGGTTCTCCATGAAGCACGACGGCACTCGAACCGACTCTCATGAGCAAGAAGCAGTCTATGACATCATGCGAGCCACCGGCAACAACTGGGCCACCGACATCCCCGACGTGTGTCGTGGCCGGTGGCACGGCATCGAGTGCATGCCAGACAAGGACAACGTCTACCATGTTGTGTCACTCTCCTTCGGAGCTCTCTCGGACGACACCGCTTTCCCTACATGCGATCCGACCCGGTCCTACATTTCACGGTCCATCACTAAACTGCCCCATCTCAAGACCCTTTTCTTTTACCGTTGCTTCAGTTACAATCCTCAGCCAATCCCTACGTTCTTAGGCAAGCTGGGCCCCACGCTACAAACCTTAGTCCTCAGAGAAAACAGCCACGTGGGTCCCATCCCAAACGAACTCGGCAACCTCACCCGTTTGAGAGTCCTGGATCTTCACAACAACAACCTCAACGGTTCAATTCCGTTGTCCCTGAACCGGATCACAGGCTTAAGGTCGCTAGACTTAAGCGGCAACAAATTAACCGGGCCCATACCCGGTTTATCGTTCCCATCCCTAAACATACTCGACTTGGGCCAAAATCTTCTAACCGGCCCAATACCATCCACCTTAGGAACCTGCCTTCCTCTCATCAAACTGGACCTCAGCCACAACCACCTTACCGGACCGGTACCGGAGAAAATCAACAGCCTAAAACAGCTCATGCTAATGGACCTGAGCTACAACAATCTCTCAGGCCCATTCCCAAAATCACTCAAAAGCCTGAGTTCTTTGCAAGCCCTGATTCTCAAAGGGAACCCAATGGGCCCTGGACCAACAATAATACCGAGGGACGGGTTCACAGGTATGGCCCAACTAATGACCCTAGTATTGTCAAACATGAACTTACACGGCCCAATACCAGACTCACTGGGCAAATTACCAAACCTTCGTGTGGTTCATCTTGACAAAAATTTCCTAAATGGGTCGGTTCCAAAAAGCTTCAAGGATCTCAAGAACCTGAGCGAACTGAGACTGAATGACAATAAGCTAAGTGGGTCAGTGCCATTTAGCAGAGAGATGGTGTGGAGGATGAAGAAGAAGCTGAGGCTTTATAACAATTCTGGGCTTTGCTATGCCGAGAAAACTGGGTTTAGGGATAGTGAAGATTCAATGTTTCATAATTATGGTATTGAGATGTGTGATGATGATGATGAGAGCTCAAATAATAATGGTGGTTCTTCGTCAGAAGGATCACTGGGTACAATAGTGCAGCATGTTTCAGTGAGTCACAAGTCCTCAGAGCAGCCAACAACAACAACCACAAATGTTGTTTCATCGGATGCTGTTCTTGTGGTTGCAGGTACAAGGTGGTTGTTGTTGGGGCACAGGGCTTCATCACTCCTTCTCCTTACTTTGGTTTTATTGTAA 1548 0.4884 MMLLYLCLPLQLLTFMFFPHLALSFSAIMSDSGVPSSLVDGPQTGFSMKHDGTRTDSHEQEAVYDIMRATGNNWATDIPDVCRGRWHGIECMPDKDNVYHVVSLSFGALSDDTAFPTCDPTRSYISRSITKLPHLKTLFFYRCFSYNPQPIPTFLGKLGPTLQTLVLRENSHVGPIPNELGNLTRLRVLDLHNNNLNGSIPLSLNRITGLRSLDLSGNKLTGPIPGLSFPSLNILDLGQNLLTGPIPSTLGTCLPLIKLDLSHNHLTGPVPEKINSLKQLMLMDLSYNNLSGPFPKSLKSLSSLQALILKGNPMGPGPTIIPRDGFTGMAQLMTLVLSNMNLHGPIPDSLGKLPNLRVVHLDKNFLNGSVPKSFKDLKNLSELRLNDNKLSGSVPFSREMVWRMKKKLRLYNNSGLCYAEKTGFRDSEDSMFHNYGIEMCDDDDESSNNNGGSSSEGSLGTIVQHVSVSHKSSEQPTTTTTNVVSSDAVLVVAGTRWLLLGHRASSLLLLTLVLL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0770 515 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 326 413 - -
Lele42g0770 515 ProSiteProfiles Leucine-rich repeat profile. 209 231 IPR001611 GO:0005515
Lele42g0770 515 SUPERFAMILY L domain-like 80 420 - -
Lele42g0770 515 Pfam Leucine rich repeat 331 390 IPR001611 GO:0005515
Lele42g0770 515 Pfam Leucine rich repeat 160 220 IPR001611 GO:0005515
Lele42g0770 515 Pfam Leucine rich repeat 258 313 IPR001611 GO:0005515
Lele42g0770 515 FunFam Piriformospora indica-insensitive protein 2 227 318 - -
Lele42g0770 515 Gene3D Ribonuclease Inhibitor 58 227 IPR032675 -
Lele42g0770 515 Gene3D Ribonuclease Inhibitor 228 432 IPR032675 -
Lele42g0770 515 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 328 397 - -
Lele42g0770 515 FunFam Piriformospora indica-insensitive protein 2 58 225 - -
Lele42g0770 515 PRINTS Leucine-rich repeat signature 210 223 - -
Lele42g0770 515 PRINTS Leucine-rich repeat signature 277 290 - -
Lele42g0770 515 SMART LRR_typ_2 377 400 IPR003591 -
Lele42g0770 515 SMART LRR_typ_2 229 253 IPR003591 -
Lele42g0770 515 SMART LRR_typ_2 183 207 IPR003591 -
Lele42g0770 515 SMART LRR_typ_2 301 328 IPR003591 -
Lele42g0770 515 SMART LRR_typ_2 353 376 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0770 Lele-ChrLele42 20723264 20724811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele42g0770 186 413 Receptor kinase-like Gene Family AT5G49660 34.043 1.42e-15 78.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0770 42 20723264 20724811 Lele37g0508 37 4130745 4135326 CCT
Lele42g0770 42 20723264 20724811 Lele38g0477 38 3834577 3839207 CCT
Lele42g0770 42 20723264 20724811 Lele39g0919 39 18142688 18153757 CCT
Lele42g0770 42 20723264 20724811 Lele40g0449 40 3704304 3708878 CCT
Lele42g0770 42 20723264 20724811 Lele43g0618 43 5475725 5477484 hybridization
Lele42g0770 42 20723264 20724811 Lele44g0570 44 4437686 4439233 hybridization