Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g0618 ATGTTTCTACCCCACCTTGCTCTCTCTTTCACGGCGATCACGTCAGATTCCGGCGTACTTTCATCTCTTGTAGACGGTCCTCAGACCGGGTTCTCCACGAAGCACGACAGCGCTCGAACCGACTCTCTCGAGCAAGAAGCAGTCTATGACATCATGCGAGCCACCGGCAATGACTGGGCCACCGACATCCCCGACGTGTGTCGTGGCAGGTGGCACGGCATCGAGTGTATGCCAGACAAGGACAACATCTACCACGTTGTGTCACTCTCCTTCGGAGCTCTCTCCGACGACACTGCTTTCCCTACATGCGACCCGACCCGATCCTACATTTCACGGTCCATCACTAAACTAACCCATCTCAAGACCCTTTTCTTTTACCGTTGTTTCAGTTACAATCCTCAGCCAATCCCTACGTTCTTAGGCAAGCTGGGCCCCACGCTACAAACCTTAGTCCTCAGAGAAAACGGCCACGTGGGTCCCATCCCAAACGAACTCGGCAACCTCACCCGTTTGAGAGTTCTTGATCTTCACAACAACCACCTCAATGGTTCAATACCGTTGTCCCTGAACCTGATCACAGGCTTAAGGTCACTAGACTTGAGCGGCAACAAATTAACCGGGCCCATACCCGGTTTAACATTACCTTCACTAAAGATACTCGACCTGGGCCAAAATCTTCTAACCGGTCCAATACCATCCTCCTTAGGAACCTGCCATACTCTAATCAAACTGGATCTCAGCCACAACCATCTCACTGGACCAGTACTGGAGAAAATCTCCGGCCTAAAGCAACTCATTCTAATGGACCTGAGCTACAACCATCTCTCAGGCCCATTCCCAAAGCTACTCAAATGCCTGAGTTCTCTACAGGCCCTGATTCTCAAAGGGAATCCAATGGGCCCAAGCCCAGCAACAATACCGAGCGACAGCTTCACCGGCATGGGCCAACTAATGACCCTAGTATTATCAAGCATGAACTTACTCGGCCCAATACCAGACTCACTGGGAAAATTACCAAACCTTCGAGTGGTTCATCTTGACAAAAATTTCTTAAACGGGTCGATTCCAAAGAGCTTGAAGGACCTGAAGAACCTGAGCGAACTGAGATTGAATGATAATAAGCTAAGTGGGTCGGTGCCATTTACCAGAGAGATGGTGTGGAGGATGAAGAAGAAGCTGAGGCTGTATAACAATGCAGGGCTGTGTTATGCGGAGAAAAGTGGGCTTAGGGATAGTGAAGATTCATTGTTTCATACTTATGGTATCGAGATGTGTGATGATGATGATGACGACGATGATGAAGAGAGCTCAAATAATAATAATGGTGGTTCATCATCAGAAGGGTCATTGGGTACAATAGTGCAGCATGTTTCAGTGAGTCACAAATCTTCTGAGCCAACAACCACCACAAATGTTGTTTCATCGGATGCTGTTCTTGCGGTTCCTGCAGGTACAAGGTGGTTGTTGTTGGGGCTCATGACTTCACTTCTTCTCATCTTTACTTTGATTTCATTGAGGGAAGAAGCTAAGTCAAAGTCGTACGTAGTAGAAATGAAGAGGATCAAGTTTAGAAAGGTTGATTAG 1584 0.4785 MFLPHLALSFTAITSDSGVLSSLVDGPQTGFSTKHDSARTDSLEQEAVYDIMRATGNDWATDIPDVCRGRWHGIECMPDKDNIYHVVSLSFGALSDDTAFPTCDPTRSYISRSITKLTHLKTLFFYRCFSYNPQPIPTFLGKLGPTLQTLVLRENGHVGPIPNELGNLTRLRVLDLHNNHLNGSIPLSLNLITGLRSLDLSGNKLTGPIPGLTLPSLKILDLGQNLLTGPIPSSLGTCHTLIKLDLSHNHLTGPVLEKISGLKQLILMDLSYNHLSGPFPKLLKCLSSLQALILKGNPMGPSPATIPSDSFTGMGQLMTLVLSSMNLLGPIPDSLGKLPNLRVVHLDKNFLNGSIPKSLKDLKNLSELRLNDNKLSGSVPFTREMVWRMKKKLRLYNNAGLCYAEKSGLRDSEDSLFHTYGIEMCDDDDDDDDEESSNNNNGGSSSEGSLGTIVQHVSVSHKSSEPTTTTNVVSSDAVLAVPAGTRWLLLGLMTSLLLIFTLISLREEAKSKSYVVEMKRIKFRKVD 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g0618 527 Gene3D Ribonuclease Inhibitor 306 407 IPR032675 -
Lele43g0618 527 Gene3D Ribonuclease Inhibitor 43 212 IPR032675 -
Lele43g0618 527 PRINTS Leucine-rich repeat signature 195 208 - -
Lele43g0618 527 PRINTS Leucine-rich repeat signature 214 227 - -
Lele43g0618 527 PANTHER OS01G0750400 PROTEIN 192 298 - -
Lele43g0618 527 FunFam Leucine-rich repeat receptor protein kinase EMS1 212 303 - -
Lele43g0618 527 Gene3D Ribonuclease Inhibitor 213 305 IPR032675 -
Lele43g0618 527 MobiDBLite consensus disorder prediction 428 450 - -
Lele43g0618 527 Pfam Leucine Rich repeats (2 copies) 193 231 IPR025875 -
Lele43g0618 527 ProSiteProfiles Leucine-rich repeat profile. 170 192 IPR001611 GO:0005515
Lele43g0618 527 SUPERFAMILY L domain-like 66 405 - -
Lele43g0618 527 SMART LRR_typ_2 168 191 IPR003591 -
Lele43g0618 527 SMART LRR_typ_2 362 385 IPR003591 -
Lele43g0618 527 SMART LRR_typ_2 286 313 IPR003591 -
Lele43g0618 527 SMART LRR_typ_2 214 238 IPR003591 -
Lele43g0618 527 SMART LRR_typ_2 338 361 IPR003591 -
Lele43g0618 527 FunFam Piriformospora indica-insensitive protein 2 43 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g0618 Lele-ChrLele43 5475725 5477484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele43g0618 145 380 Receptor kinase-like Gene Family AT5G49660 36.975 1.18e-35 140
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0770 42 20723264 20724811 Lele43g0618 43 5475725 5477484 hybridization