Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g0570 ATGATGCTTCTCTATCTTTTTCTCCCTCTGCAACTCCTAACTTTCATGTTTTTTCCCCACCTCGCTCTATCTTTCTCGGCGATCATGTCAGATTCCGGTGTGCCTTCATCTCTTGTTGACGGTCCTCAGACCGGGTTCTCCGTGAAGCACGACGGCGCTCGAACCGACTTTCATGAGCAAGAAGCAGTCTATGACATCATGCGAGCCACCGGCAACAACTGGGCCACCGACATCCCCGACGTGTGTCGTGGCCGGTGGCACGGCATTGAGTGCATGCCAGACAAGGACAACATCTACCATGTTGTGTCACTCTCCTTCGGAGCTCTCTCGGACGACACGGCTTTCCCTACATGCGACCCGACCCGGTCCTACATTTCACGGTCCATCACTAAACTGCCCCATCTCAAGACCCTTTTCTTTTACCGTTGCTTCAGTTACAATCCTCAGCCAATCCCTACGTTCTTAGGCAAGCTTGGCCCCACGCTACAAACCTTAGTCCTCAGAGAAAACAGCCACGTGGGTCCCATCCCAAACGAACTCGGCAACCTCACCCGTTTGAGAGTCCTGGATCTTCACAACAACAACCTCAACGGTTCAATTCCGTTGTCCCTGAACCGGATCACAGGCTTAAGGTCACTAGACTTAAGCGTCAACAAATTAACCGGGCCCATACCCGGTTTATCGTTCCCATCCCTAAACATACTCGACATGGGCCAAAATCTTCTAACCGGCCCAATACCATCCACCTTAGGAACCTGCCTTCCTCTCATCAAACTGGACCTCAGCCACAACCACCTTACCGGACCGGTACCGGAGAAAATCAACAGCCTTAAACAGCTCATGCTAATGGACCTGAGCTACAACAATCTTTCAGGCCCATTCCCAAAATCACTCAAAAGCCTGAGTTCATTGCAAGCTCTGATTCTCAAAGGGAACCCAATGGGCCCTGGCCCAACAACAATACTGAGTGACGGGTTCACAGGCATGGCCCAACTAATGACCCTAGTGTTATCAAACATGAACTTACACGGCCCAATACCAGACTCACTGGGCAAATTACCAAACCTTCGTGTGGTTCATCTTGACAAAAATTTCTTAAACGGGTCGGTTCCAAAAAGCTTCAAGGATCTCAAGAACCTGAGCGAACTGAGACTGAATGACAATAAGCTAAGTGGGTCAGTGCCATTTAGCAGAGAGATGGTGTGGAGGATGAAGAAGAAGCTGAGGCTTTATAACAATTCTGGGCTTTGTTATGCTGAGAAAATTGGGTTTAGGGATAGTGAAGATTCAATGTTTCATAAGTATGGTATTCAGATGTGCGACGATGATGATGAGAGCTCAAATAATAATGGTGGTTCTCCATCAGAAGGATCACTGGGTACAATAGTGCAGCATGATTCAGTTAGTCACAAGTCCTCAGAGCAGCCAACAACAACCACCACAAACGTTGTTTCATCGGATGCTGTTCTTGTGGTTGCAGGTACAAGGTGGTGGTTGTTGGGGCTCAGGACTTCATCACTTCTTCTCTTCACTTTGATTTTATTGTAA 1548 0.4832 MMLLYLFLPLQLLTFMFFPHLALSFSAIMSDSGVPSSLVDGPQTGFSVKHDGARTDFHEQEAVYDIMRATGNNWATDIPDVCRGRWHGIECMPDKDNIYHVVSLSFGALSDDTAFPTCDPTRSYISRSITKLPHLKTLFFYRCFSYNPQPIPTFLGKLGPTLQTLVLRENSHVGPIPNELGNLTRLRVLDLHNNNLNGSIPLSLNRITGLRSLDLSVNKLTGPIPGLSFPSLNILDMGQNLLTGPIPSTLGTCLPLIKLDLSHNHLTGPVPEKINSLKQLMLMDLSYNNLSGPFPKSLKSLSSLQALILKGNPMGPGPTTILSDGFTGMAQLMTLVLSNMNLHGPIPDSLGKLPNLRVVHLDKNFLNGSVPKSFKDLKNLSELRLNDNKLSGSVPFSREMVWRMKKKLRLYNNSGLCYAEKIGFRDSEDSMFHKYGIQMCDDDDESSNNNGGSPSEGSLGTIVQHDSVSHKSSEQPTTTTTNVVSSDAVLVVAGTRWWLLGLRTSSLLLFTLILL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g0570 515 FunFam Piriformospora indica-insensitive protein 2 58 225 - -
Lele44g0570 515 FunFam Piriformospora indica-insensitive protein 2 227 318 - -
Lele44g0570 515 MobiDBLite consensus disorder prediction 443 480 - -
Lele44g0570 515 Gene3D Ribonuclease Inhibitor 228 428 IPR032675 -
Lele44g0570 515 Pfam Leucine rich repeat 331 390 IPR001611 GO:0005515
Lele44g0570 515 Pfam Leucine rich repeat 258 313 IPR001611 GO:0005515
Lele44g0570 515 PRINTS Leucine-rich repeat signature 277 290 - -
Lele44g0570 515 PRINTS Leucine-rich repeat signature 256 269 - -
Lele44g0570 515 Gene3D Ribonuclease Inhibitor 58 227 IPR032675 -
Lele44g0570 515 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 61 313 - -
Lele44g0570 515 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 328 397 - -
Lele44g0570 515 SUPERFAMILY L domain-like 80 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g0570 Lele-ChrLele44 4437686 4439233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele44g0570 186 413 Receptor kinase-like Gene Family AT5G49660 34.468 7.79e-16 79.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0770 42 20723264 20724811 Lele44g0570 44 4437686 4439233 hybridization