Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele42g0199 ATGTCATCCCGTTTTGCTCCGATTTTCGCTTCCTATTTCCCCATCTCTTCCTCTCTCTCTTCACGGAGACCGGCCCTCATCGGCGCTAATCACACCTCCGCTCGTGTTAAATCTGCTGCAATGGAGACTGCCGCTGGGAAGCTCGGCTTTCTCAGGAATATTCTCATACGGTTGCTTTTTTTTGGGGTTTTCATTATAGTCGTTCGGTTTGCTTATGTCATCACGATCGCCGGCGAGTCTTGCAATGTTGGCGACTTCTGCTTCTTCTCCCTTCCGGAGTCTCTCAACTTTGTGGTCGCCGGCTCTGGGACCGGGGCTTTGGCTGTCGCGTCTAATGAGGCCGTCGTTAGCCGATCTGCGGTGCGACAGAAGGTTTACTCGAGTGAAGAGTGGAACCAGGCCGTTAGTTTCTACTCATCCGTGTTCAAGGATCTCGTATCTTATGGCTATCTCTCGCCGGAGTCGAAATCTCTCTGCGTTGAGACGCCGACTGGTCGCGACGTAATCGCATTGAAGGAGATCGGCGTCTCGGACTCGATTGGGATTGCAAAGAAAGCCTCGAAGCCACTGGTGAAAGCAGGACAGGCTCATCGAATGCCCTTTCGCGACAACACATTCGACTTCATCTTTTCCGGCGAGGGCGGGCTTGAGAAATCGACGCGACCTTCAGATTTCGCCTGTGAGATTACTCGGACTCTGAAACCCGAAGGGTTTGTGGTGTTCCATGTAAAGGCTAAAGATACGTATAGTTTCAACTCATTCCTTGATTTGTTTACTAATTTCAAAGTAGTGAAAACACATGATATAGATGGATTTGATTCTTCAATGCCTCACATACGAGAAATTGTTTTGAGGAAAGAGTTTGATGGCATTGATCATGAGTTTGAGAAATTCGACGATGATTCTAGTGGGAAATGCTCTACTCATGGGCACAAACAAGAATTGGTCAGAAATGCAGAACCTTTGATCACTGAGGAGCCACTGAAACCATGGATTACTCTGAAGAGGAACATAAAGAACATAACGTACCTTCCATCAATGGTTGATATAAGCTTCAAGAATAGGTATGTTTATGTTGATGTTGGAGCTAGAAGTTATGGCTCTAGTATCGGAAGTTGGTTCAGGAAGCAGTATCCAAAACAGAACAAGACCTTTAATGTTTATGCAATTGAGGCTGATAAAACTTTCCATCAAGAGTATAGCGTGAAGAAGGGAATCACTCTGCTACCTTATGCTGCTTGGGTAAAGAATGAAACTTTAACCTTTGAGATTCATCGGGACCCCGGCGAGCAGGTCGACGTCAAGGGCAGAGGTATGGGTAGGATTCAGCCGTTGCAGTCATCAACATCATCACCATCTGGTGATTTTGATGGTGAAGTTGAGAAAATCCAAGGGTTTGATTTTGCAAACTGGCTGAAGAACACAGTCTCAAAGAATGATTTTGTTGTGATGAAGATGGACGTGGAAGGTACAGAATTCGATCTGATCCCGAGATTGTTCGAAACAGGAGCTATTTGTTTGGTGGACGAGATTTTTCTCGAGTGCCACTACAATAGATGGCAAAGATGTTGCCCTGGGCAGAGGAGTCCAAAGTATGAGAAAACATATGATCAATGCTTGGAGCTCTTCACTTCTCTAAGGCAAAGTGGAGTTCTTATACGACTAGTCCATTTGCTTTTTGGTGTTCAAGTAAATGAGAAATTCATAAATATGGTTGGTAAGAATCTGTTGTCGAGTTGGAGCAAAACAGTCAATGAAGGGGGGCTTTTGGAAGTGTGTGGGGTAGGAGTAGCGAGGAACAGGCAATGGGTGGTTGAAGCACGAGTGGGTCATTAA 1836 0.4564 MSSRFAPIFASYFPISSSLSSRRPALIGANHTSARVKSAAMETAAGKLGFLRNILIRLLFFGVFIIVVRFAYVITIAGESCNVGDFCFFSLPESLNFVVAGSGTGALAVASNEAVVSRSAVRQKVYSSEEWNQAVSFYSSVFKDLVSYGYLSPESKSLCVETPTGRDVIALKEIGVSDSIGIAKKASKPLVKAGQAHRMPFRDNTFDFIFSGEGGLEKSTRPSDFACEITRTLKPEGFVVFHVKAKDTYSFNSFLDLFTNFKVVKTHDIDGFDSSMPHIREIVLRKEFDGIDHEFEKFDDDSSGKCSTHGHKQELVRNAEPLITEEPLKPWITLKRNIKNITYLPSMVDISFKNRYVYVDVGARSYGSSIGSWFRKQYPKQNKTFNVYAIEADKTFHQEYSVKKGITLLPYAAWVKNETLTFEIHRDPGEQVDVKGRGMGRIQPLQSSTSSPSGDFDGEVEKIQGFDFANWLKNTVSKNDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGQRSPKYEKTYDQCLELFTSLRQSGVLIRLVHLLFGVQVNEKFINMVGKNLLSSWSKTVNEGGLLEVCGVGVARNRQWVVEARVGH 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele42g0199 611 Gene3D Vaccinia Virus protein VP39 164 320 IPR029063 -
Lele42g0199 611 Gene3D Vaccinia Virus protein VP39 342 521 IPR029063 -
Lele42g0199 611 PANTHER METHYLTRANSFERASE 41 553 - -
Lele42g0199 611 Pfam Methyltransferase domain 187 241 IPR013216 GO:0008168
Lele42g0199 611 Pfam Methyltransferase FkbM domain 360 522 IPR006342 -
Lele42g0199 611 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 342 500 IPR029063 -
Lele42g0199 611 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 191 272 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele42g0199 Lele-ChrLele42 1636842 1639604 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1391 37 22655518 22656516 Lele42g0199 42 1636842 1639604 CCT
Lele38g1266 38 23441877 23442994 Lele42g0199 42 1636842 1639604 CCT
Lele42g0199 42 1636842 1639604 Lele43g1157 43 19949372 19950940 hybridization
Lele42g0199 42 1636842 1639604 Lele44g1147 44 20102159 20106085 hybridization