Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele43g1157 ATGGAGACTGCCGCTGGGAAGCCCAGCTTTCTCGGGAATATTCTCATACGGTTGCTGGTTTTTGGGGTTTTCATTATAGTCGTTCGGTTTGCTTATGTCATCACCATCGCCGGCGAGTCTTGCAACGTCGGCGACTTCTGCTTCTTCTCCCTTCCGGAGTCTCTCGACTTTGTGGTCGCTGGCTCCGGGGCTGGGGCTTTGGCTGTCGCGTCCAGTGAGGCCGTCGTTAGCCGATCTGCGGCACGACCGGAGGTTTACTCGAGCAAAGAGTGGAACGAGGCCGTTAGTTTCTACTCATCCGTGTTCAAGGATCTCTTATCTTATGGCTATCTCTCGCCGGAGTCGAAATCTCTCTGCGTTGATACGCCAACCGGTCGCGACGTTTTCGCATTGAAGGAGATCGGCGTCTCGGACTCGATTGGGATTGCAAAGAAAGCTTCGAAGCCACTGGTGAAAGCAGGACAGGCTCATCGTATGCCCTTTCGCGACAACACATTCGACTTCATCTTTTCCGGCGAGGGTGGGCTTGAGAAATCGACGCGACCTTCAGACTTCGCCTCTGAGATTACTCGGACTCTGAAACCCGAAGGGTTTGTGGTGTTCCATGTAAAGGCTAAGGATACGTATAGTTTCAATTCATTCCTGGATTTGTTTACTAATTTCAAAGTAGTGAAAACGCATGATATAGATGGATTTGATTCTTCAATGCCTCACGTACGAGAAATTGTTTTGAGGAAGGAGTTTGATGGTATTGTTCATGAGTTTGAGAAATTCGACGATGATTCTAATGCCAAATGCTCTCCACATGGGCACAAACAAGAATTGGTCAGAAATGCAGAGCCTTTGATCACTGAGGAGCCACTGAAACCATGGATTACTCTGAAGAGGAACATAAAGAACATAAAGTACCTTCCATCAATGGTTGATATAAGCTTCAAGAATAGGTATGTTTATGTTGATGTTGGAGCTAGAAGTTATGGCTCTAGCATAGGAAGCTGGTTTAGGAAGCAGTATCCAAAACAGAACAAAACCTTTCATGTATATGCAATTGAGGCTGATAAAACTTTTCATCAAGAGTATAGCGTGAAGAAGCGAATCACTCTGCTACCTTATGCTGCTTGGGTAAAGAATGAAACTTTAACCTTTGAGATTCATCGGGATCCCGGCGAGCATGTTGACGTCAAGGGCAGAGGCATGGGTAGGATTCAGCCGTTGCAGTCGTCGTCGTCGTCATCGTCATCGTCATCATCAGCTGGTGATTTTGATGGTGAAGTTGAGAAAATCCAAGGGTTTGATTTTGCAAACTGGTTGAAGAACACAGTGTCAAAGAATGATTTTGTTGTGATGAAGATGGACGTGGAAGGTACAGAATTTGATCTGATCCCGAGATTGTTCGAAACCGGAGCTATTTGTTTGGTGGACGAGATTTTTCTTGAATGCCACTATAATAGATGGCAAAGATGTTGCCCTGGGCAGAGGAGTCCAAAGTATGAGAAAACATATGATCAATGCTTGGAGCTCTTCACTTCTCTGAGGCAGAGTGGAGTTCTTGTTCATCAATGGTGGTAA 1569 0.4589 METAAGKPSFLGNILIRLLVFGVFIIVVRFAYVITIAGESCNVGDFCFFSLPESLDFVVAGSGAGALAVASSEAVVSRSAARPEVYSSKEWNEAVSFYSSVFKDLLSYGYLSPESKSLCVDTPTGRDVFALKEIGVSDSIGIAKKASKPLVKAGQAHRMPFRDNTFDFIFSGEGGLEKSTRPSDFASEITRTLKPEGFVVFHVKAKDTYSFNSFLDLFTNFKVVKTHDIDGFDSSMPHVREIVLRKEFDGIVHEFEKFDDDSNAKCSPHGHKQELVRNAEPLITEEPLKPWITLKRNIKNIKYLPSMVDISFKNRYVYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHQEYSVKKRITLLPYAAWVKNETLTFEIHRDPGEHVDVKGRGMGRIQPLQSSSSSSSSSSSAGDFDGEVEKIQGFDFANWLKNTVSKNDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGQRSPKYEKTYDQCLELFTSLRQSGVLVHQWW 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele43g1157 522 Pfam Methyltransferase domain 146 201 IPR013216 GO:0008168
Lele43g1157 522 PANTHER METHYLTRANSFERASE 1 522 - -
Lele43g1157 522 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 233 IPR029063 -
Lele43g1157 522 Gene3D Vaccinia Virus protein VP39 124 276 IPR029063 -
Lele43g1157 522 Pfam Methyltransferase FkbM domain 320 488 IPR006342 -
Lele43g1157 522 Gene3D Vaccinia Virus protein VP39 301 486 IPR029063 -
Lele43g1157 522 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 302 465 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele43g1157 Lele-ChrLele43 19949372 19950940 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1391 37 22655518 22656516 Lele43g1157 43 19949372 19950940 CCT
Lele38g1266 38 23441877 23442994 Lele43g1157 43 19949372 19950940 CCT
Lele41g0205 41 1647701 1650395 Lele43g1157 43 19949372 19950940 hybridization
Lele42g0199 42 1636842 1639604 Lele43g1157 43 19949372 19950940 hybridization