Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1266 ATGGTGACTAACCATTCTAGTGATGATATTACTCCTTTGGGTATGCACTATGCAGAAGCCATTTTTGGAACAACAGAGACTCAAATTCTGTCGGCTGGTACGATGACTTCATCTGCTATTGTAGGAGGCTTGCAAGAACCAGCAAGCCCAAACGATTTCAAAGCCATTTCTCTGCAAATTTCATCATCCCGGAAGGGACTGCTAACTGAAGAAAAAGTGGAAGAAGCCATTCCAGTGTCAGAATACTGTGGGATCGGAAAAATCTGCAGAGAGTGGATTAACAACCCTATGAACATAACCCTTGTGATATGGATAACTTGTGTGGCAATCTCAGGAGGAATTCTGTTTCTTGTAATCACAGGAATGTTAGATAAAGTCCTAACCAAGAAATCAGAAAGACCTAATGTTGGTGTTGCTATTTGCCTCTCCATAGCCATTGCTGCTCCAGCAATAGCAGAGAAAAAATTATCATCTGCATCAAGAAATGAGGAGAATGGTGGATGTGTGCAACCTGCACTGGCTTCATTGCCTCATGATGACAAAGCTACTCAGTTCAGAACAATCTCGACTTATCCAATGTGGAGTAGTCCTAGGTTGTGCAAGATCTGA 609 0.422 MVTNHSSDDITPLGMHYAEAIFGTTETQILSAGTMTSSAIVGGLQEPASPNDFKAISLQISSSRKGLLTEEKVEEAIPVSEYCGIGKICREWINNPMNITLVIWITCVAISGGILFLVITGMLDKVLTKKSERPNVGVAICLSIAIAAPAIAEKKLSSASRNEENGGCVQPALASLPHDDKATQFRTISTYPMWSSPRLCKI 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1266 202 Pfam Protein of unknown function (DUF2985) 91 133 IPR021369 -
Lele38g1266 202 PANTHER PLAC8 FAMILY PROTEIN-RELATED 80 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1266 Lele-ChrLele38 23441877 23442994 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g1266 38 23441877 23442994 Lele41g0205 41 1647701 1650395 CCT
Lele38g1266 38 23441877 23442994 Lele42g0199 42 1636842 1639604 CCT
Lele38g1266 38 23441877 23442994 Lele43g1157 43 19949372 19950940 CCT
Lele38g1266 38 23441877 23442994 Lele44g1147 44 20102159 20106085 CCT
Lele38g1266 38 23441877 23442994 Lele39g0036 39 279587 280585 hybridization
Lele38g1266 38 23441877 23442994 Lele40g1211 40 21935334 21936453 hybridization