Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele44g1147 ATGAAGATCTCGGGGGATTTGAATAGAAAAGAATCCATCATCAAACTTCTCAGTGCTGCAAATGATAAACTTAGAAGGGATTGTGATAAAAAGTTAAGAAAATGGGAAGATGAGAAGAAAGTGTTGGTATTGGTGTTGGAGGAGATGAAGTTAGATTCTCAGATCAAAATATCAGACAGAAGCAATGGAAGAGCTCAAAAAGGAGTTGAAAATAAGTTAAATATCAACTTATATCAGGAAGTTTCCAAGTCTCATATATGGCATACATTTAACATGGAATATGAATTGCAAATATGGACGTCAATTGTTGAACGGTTAAAGAATGACCTTGAAGAAAATAATGTGATATGTAAAGAACTAGAAAACTCACTTCTTGCACAAACAAATTTTCTATCGGAAGGTGTTAAATCTACTGCAATGGAGACTGCCGCTGGGAAGCCCGGCTTTCTCAGGAATATTCTTATACGGTTGCTCTTCTTTGGGGTTTTCATTATAGTCGTTCGGTTTGCTTATGTCATCACCATCGCCGGCGAGTCTTGCAACGTTGGCGACTTCTGCTTCTTCTCCCTTCCGGAGTCTCTCAACTTTGTGGTCGCCGGCTCTGGCGCCGGGGCTTTGGCTGTCGCGTCTAATGAGGCCGTCGTTAGCCGATCTGCGGCGCGACAGAAGGTTTACTCGAGTGAAGAGTGGAAAGAGGCCGTTAGTTTCTACTCATCCGTGTTCAAGGATCTCGTATCTTATGGATATCTCTCGCCGGAGTCAAAATCTCTCTGCGTTGAGACTCTGACTGGTCGCGACGTAATCGCATTGAAGGAGATCGGCATCTCGGACTCGATTGGGATTGCAAAGAAAGCCTCGAAGCCACTGGTGAAAGCAGGACAGGCTCATCGTATGCCCTTTCGCGACAACACATTCGACTTCATCTTTTCCGGCGAGGGCGGGCTTGAGAAATCTACGCGACCTTCAGATTTCGCATCTGAGATTACTCGGACTCTGAAACCCGAAGGGTTTGTGGTGTTCCATGTAAAGGCTAAAGATACGTATAGTTTCAACTCATTCCTTGATTTGTTTACTAATTTCAAAGTAGTGAAAACACATGATATAGATGGATTTGATTCTTCAATGCCTCACATACGAGAAATTGTTTTGAGGAAAGAGTTTGATGGCATTGTTCATGAGTTTGAGAAATTCGACGATGATTCTAGTGGGAAATGCTCTACTCATGGGCACAAACAAGAATTGGTCAGAAATGCAGAACCTTTGATCACTGAGGAGCCACTGAAACCATGGATTACTCTGAAGAGGAACATAAAGAACATAAAGTACCTTCCATCAATGGTTGATATAAGCTTCAAGAATAGGTATGTTTATGTTGATGTTGGAGCTAGAAGTTATGGCTCTAGTATAGGAAGTTGGTTCAGGAAGCAGTATCCAAAACAGAACAAAACCTTTCATGTTTATGCAATTGAGGCTGATAAAACTTTCCATCAAGAGTATAGCGTGAAGAAGGGAATCACTCTGCTACCTTATGCTGCTTGGGTAAAGAATGAAACTTTAACCTTTGAGATTCATCGGGACCCTGGCGAGCAGGTCGACGTCAAGGGCAGAGGTATGGGTAGGATTCAGCCGTTGCAGTCATCAGCATCATCATCATCATCATCATCTGGTGATTTTGATGGTGAAGTTGAGAAAATCCAAGGGTTTGATTTTGCAAACTGGCTGAAGAACACAGTCTCAAAGAATGATTTTGTTGTGATGAAGATGGACGTGGAAGGTACAGAATTCGATCTGATCCCGAGATTGTTCGAAACAGGAGCTATTTGTTTGGTGGACGAGATTTTTCTCGAGTGCCACTACAATAGATGGCAAAGATGTTGCCCTGGGCAGAGGAGTCCAAAGTATGAGAAAACATATGATCAATGCTTGGAGCTCTTCACTTCTCTGAGGCAAAGTGGAGTTCTTGTTCATCAATGGTGGTAA 1980 0.4247 MKISGDLNRKESIIKLLSAANDKLRRDCDKKLRKWEDEKKVLVLVLEEMKLDSQIKISDRSNGRAQKGVENKLNINLYQEVSKSHIWHTFNMEYELQIWTSIVERLKNDLEENNVICKELENSLLAQTNFLSEGVKSTAMETAAGKPGFLRNILIRLLFFGVFIIVVRFAYVITIAGESCNVGDFCFFSLPESLNFVVAGSGAGALAVASNEAVVSRSAARQKVYSSEEWKEAVSFYSSVFKDLVSYGYLSPESKSLCVETLTGRDVIALKEIGISDSIGIAKKASKPLVKAGQAHRMPFRDNTFDFIFSGEGGLEKSTRPSDFASEITRTLKPEGFVVFHVKAKDTYSFNSFLDLFTNFKVVKTHDIDGFDSSMPHIREIVLRKEFDGIVHEFEKFDDDSSGKCSTHGHKQELVRNAEPLITEEPLKPWITLKRNIKNIKYLPSMVDISFKNRYVYVDVGARSYGSSIGSWFRKQYPKQNKTFHVYAIEADKTFHQEYSVKKGITLLPYAAWVKNETLTFEIHRDPGEQVDVKGRGMGRIQPLQSSASSSSSSSGDFDGEVEKIQGFDFANWLKNTVSKNDFVVMKMDVEGTEFDLIPRLFETGAICLVDEIFLECHYNRWQRCCPGQRSPKYEKTYDQCLELFTSLRQSGVLVHQWW 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele44g1147 659 PANTHER METHYLTRANSFERASE 140 659 - -
Lele44g1147 659 Pfam Methyltransferase domain 285 340 IPR013216 GO:0008168
Lele44g1147 659 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 441 602 IPR029063 -
Lele44g1147 659 Coils Coil 7 27 - -
Lele44g1147 659 Pfam Methyltransferase FkbM domain 459 624 IPR006342 -
Lele44g1147 659 Gene3D Vaccinia Virus protein VP39 262 416 IPR029063 -
Lele44g1147 659 Gene3D Vaccinia Virus protein VP39 440 623 IPR029063 -
Lele44g1147 659 Coils Coil 103 123 - -
Lele44g1147 659 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 290 371 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele44g1147 Lele-ChrLele44 20102159 20106085 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1391 37 22655518 22656516 Lele44g1147 44 20102159 20106085 CCT
Lele38g1266 38 23441877 23442994 Lele44g1147 44 20102159 20106085 CCT
Lele41g0205 41 1647701 1650395 Lele44g1147 44 20102159 20106085 hybridization
Lele42g0199 42 1636842 1639604 Lele44g1147 44 20102159 20106085 hybridization