Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g1255 ATGCCGTGCTTGAACCTCTCCACTAATGTCAGCCTCGACGGCGTCGACACCTCCTCCATCCTCTCTGAAGCCACCTCCTCCGTCGCCAAGCTTATCGGCAAACCTGAGGCCTATGTAATGATTGTCCTGAAAGGATCGGTGCCCATATCTTTTGGTGGGAACGAACAGCCAGCTGCTTATGGTGAGCTGGTGTCAATTGGTGGTCTTGGCCCTGACGTAAACAAGAAGCTTAGTGCTGCAATTTCCTCAATTCTCGAAACCAAGTTGTCTGTTCCCAAGTCACGATTCTTCTTGAAATTCTATGACTCGAAGGCAAGTTTACCTATAACTTCAAGTTGTCCTGAAAATATAGGAGGAATTGCTCTATGCTCTTTCCTTATTTCATTCTTCCTCTTTAGGCTAATCTGA 408 0.4657 MPCLNLSTNVSLDGVDTSSILSEATSSVAKLIGKPEAYVMIVLKGSVPISFGGNEQPAAYGELVSIGGLGPDVNKKLSAAISSILETKLSVPKSRFFLKFYDSKASLPITSSCPENIGGIALCSFLISFFLFRLI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g1255 135 Gene3D Macrophage Migration Inhibitory Factor 2 118 IPR014347 -
Lele38g1255 135 SUPERFAMILY Tautomerase/MIF 1 105 IPR014347 -
Lele38g1255 135 Pfam Macrophage migration inhibitory factor (MIF) 2 105 IPR001398 -
Lele38g1255 135 FunFam Tautomerase/MIF superfamily protein 1 111 - -
Lele38g1255 135 PANTHER D-DOPACHROME DECARBOXYLASE 1 106 IPR001398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g1255 Lele-ChrLele38 23365834 23367176 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0201 41 1625332 1627249 Lele38g1255 38 23365834 23367176 CCT
Lele38g1255 38 23365834 23367176 Lele39g0045 39 332794 334665 hybridization
Lele38g1255 38 23365834 23367176 Lele40g1197 40 21859926 21861847 hybridization