Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele40g0233 ATGGACAGGTGGGATAAATCACAACGAGATCGCTACCAAGGCCAAAGGTACTACAGAGAGAATCCATCTTTCTCTTCTACTCTTCTTGACGCCATTTATCGATCCATCGACGAGGGAGAAACAGAGGAGAAAGAAAACCAGCTTGTGCTCTACAGAGAAACCATGAAGAAGCAAAAACAGAGCAACTTGTTCAATAACGATCATGATGACGAAGCTAAAGCATCGAGCTTTCGTCTATCTCGAAAGGTTGAAAACTGGATGGATGCAAGGGTGTGCGAGAAAGTTGATGTTCGAAGAAATTCCATACATTCTAGCTCAAGCTCAACAGATTCCAGCTCAAATGGCGGGTTTTCTTCTTCAGAATCATCAGCAGAGCTCTTCAATGGCGTCCAGAGGCTGAAGCCAATTCGAACCAGTGTTGCTCCTCCTCAAAAACCAAACTTTGATTCTCTAAACTCGCTCAAGAACTATTCTGCTCATACCCAGAAGCCAAAACAGGAAAATGGCTACGAGAAGAAGACGACGAAATCGAAAGCTCTGAGACGAATCCTATACGGAGACTTGAAGAAATCAAAGCAACCTATTTCACCAGGAGCTAAACTCGCAAGTTTTCTGAATTCTCTCTTCAATTCTGGTGGTGGAAACAACAACAATGCCAAAAAGAAACCAAAGGTGGTGTCGTCGTCAAATACTCTCACGCAACCTTCAACAACTTGTTCTTCAGCATCTTCGTTTTCAAGGTCTTGTTTGAGCAAAACCCCATCATCATCAAGATCAGCAGCGAAGGCAAACAGGTCTGTGAGATTCTGCCCAGTTAGTGTCATAGTTGATGAAGATTGCAGGCCATGTGGGCACAAGAATCTTTACGAAGGAGAAGAAAAGGGTATCGAGAAATTCAGTTATATCAGCAAGAACAACAGAAACAATGAAGAGCTAAAGTTCCATGTGATGCAAGAGAGTCGAAGAGTTGAGGAGTACGCGAGAGATTTGTTGAGGAATTATCAGAAGAAGAAGGAAAATGATGACGATGATGCAGCAAGTTGTTCAAGTTCTGATCTTTTTGAATTGGAAAATCTTTCAGGAATTGGGAATAATATTGAAAGGTATAGAGAAGAATTGCCAGTGTATGAAACTACCCATTTCAGTACCAAACGAGCCATTTCCAACAATGGCTTCATGCTGTAA 1185 0.4203 MDRWDKSQRDRYQGQRYYRENPSFSSTLLDAIYRSIDEGETEEKENQLVLYRETMKKQKQSNLFNNDHDDEAKASSFRLSRKVENWMDARVCEKVDVRRNSIHSSSSSTDSSSNGGFSSSESSAELFNGVQRLKPIRTSVAPPQKPNFDSLNSLKNYSAHTQKPKQENGYEKKTTKSKALRRILYGDLKKSKQPISPGAKLASFLNSLFNSGGGNNNNAKKKPKVVSSSNTLTQPSTTCSSASSFSRSCLSKTPSSSRSAAKANRSVRFCPVSVIVDEDCRPCGHKNLYEGEEKGIEKFSYISKNNRNNEELKFHVMQESRRVEEYARDLLRNYQKKKENDDDDAASCSSSDLFELENLSGIGNNIERYREELPVYETTHFSTKRAISNNGFML 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele40g0233 394 MobiDBLite consensus disorder prediction 100 122 - -
Lele40g0233 394 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 392 IPR039621 GO:0009734
Lele40g0233 394 MobiDBLite consensus disorder prediction 214 257 - -
Lele40g0233 394 MobiDBLite consensus disorder prediction 101 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele40g0233 Lele-ChrLele40 1839986 1841170 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1175 39 20432868 20434082 Lele40g0233 40 1839986 1841170 ECH
Lele40g0233 40 1839986 1841170 Lele40g0233 40 1839986 1841170 ECH
Lele40g0233 40 1839986 1841170 Lele01g0730 01 4288117 4289469 ECH
Lele40g0233 40 1839986 1841170 Lele02g0712 02 4312124 4313497 ECH
Lele40g0233 40 1839986 1841170 Lele03g0728 03 4299804 4301156 ECH
Lele40g0233 40 1839986 1841170 Lele04g0729 04 4466231 4467580 ECH
Lele37g0249 37 1974965 1976176 Lele40g0233 40 1839986 1841170 hybridization
Lele38g0249 38 1965942 1967171 Lele40g0233 40 1839986 1841170 hybridization