Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0249 ATGGACAGGTGGGATAAATCACAACGAGATCGCAACCAAAACCAAAGGTGCTACAGAGAGAATCCATCTTTCTCTTCTACTCTTCTTGACGCCATTTATCGATCCATCGACGAAGGAGAAACGGAGGAGAAAGAAAACCAGCTTGTGCTCTACAGAGAAACCATGAAGAAGCAAAAACAGAGCAACTTGTTCAATAACGATCATGATGACGAAGCTAAAGCATCGAGCTTTCGTCGATCTCGAAAGGTTGAAAACTGGATGGATGCAAGGGTGTGCGAGAAAGTTGATGTTCGAAGAAATTCCATACATTCTAGCTCAAGCTCCACAGATTCCAGCTCAAATGGCGGGTTTTCTTCTTCAGAATCATCATCAGAGCTCTTCCATGGCGTCCAGAGGCTGAAGCCAATTCGAACCAGTGTTGCTCCTCCTCAAAAACCAAACTTTGATTCTCTAAACTCGCACAAGAACTATTCTGCTCATACCCAGAAGCCAAAGCAGGAAAATGGCTTCGAGAAGAAGACGACGAAATCGAAAGCTCTGAGACGAATCCTATACGGAGACTTGAAGAAATCAAAGCAACCTATTTCACCCGGAGCTAAACTCGCAAGTTTTCTGAATTCTCTCTTCAATTCTGGTGGTGGAAACAACAACAATGCCAAAAAGAAACCAAAGGTGGTGTCGTCGTCAAACACTCTTACGCAACCTTCAACAACTTGTTCTTCAGCATCTTCGTTTTCAAGGTCTTGTTTGAGCAAAACCCCATCATCATCAAGATCAGCACCGAAGGCAAACAGGTCTGTGAGATTCTGCCCAGTTAGTGTCATAGTTGATGAAGATTGCAGGCCATGTGGGCACAAGAATCTTTACGAAGAAGAAGAAAAGGGTATCAAGAAATTCAGTTATATCAACAAGAACAACAGTAACAATGAAGAGCTAAAGTTCCATGTGATGGAAGAGAGTCGAAGAGTTGAGGAGTACGCGAGAGATTTGTTGAGGAATTATCAGAAGAAGAAGGAAGATGTTAACAAGTTTGATGATGAAATGATGCATTATGGAGAAGATGTTGATGATGATGATGCAGCAAGTTGTTCAAGTTCTGATCTTTTTGAATTGGAAAATCTTTCAGGAATTGGGAATAATATTGAAAGGTATAGAGAAGAATTGCCAGTGTATGAAACTACCCATTTCAGTACCAAACGAGCCATTTCCAACAATGGCTTCATGCTGTAA 1230 0.4163 MDRWDKSQRDRNQNQRCYRENPSFSSTLLDAIYRSIDEGETEEKENQLVLYRETMKKQKQSNLFNNDHDDEAKASSFRRSRKVENWMDARVCEKVDVRRNSIHSSSSSTDSSSNGGFSSSESSSELFHGVQRLKPIRTSVAPPQKPNFDSLNSHKNYSAHTQKPKQENGFEKKTTKSKALRRILYGDLKKSKQPISPGAKLASFLNSLFNSGGGNNNNAKKKPKVVSSSNTLTQPSTTCSSASSFSRSCLSKTPSSSRSAPKANRSVRFCPVSVIVDEDCRPCGHKNLYEEEEKGIKKFSYINKNNSNNEELKFHVMEESRRVEEYARDLLRNYQKKKEDVNKFDDEMMHYGEDVDDDDAASCSSSDLFELENLSGIGNNIERYREELPVYETTHFSTKRAISNNGFML 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0249 409 MobiDBLite consensus disorder prediction 138 176 - -
Lele38g0249 409 MobiDBLite consensus disorder prediction 101 126 - -
Lele38g0249 409 MobiDBLite consensus disorder prediction 143 164 - -
Lele38g0249 409 MobiDBLite consensus disorder prediction 214 263 - -
Lele38g0249 409 MobiDBLite consensus disorder prediction 1 21 - -
Lele38g0249 409 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 407 IPR039621 GO:0009734
Lele38g0249 409 MobiDBLite consensus disorder prediction 1 16 - -
Lele38g0249 409 Coils Coil 327 347 - -
Lele38g0249 409 MobiDBLite consensus disorder prediction 100 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0249 Lele-ChrLele38 1965942 1967171 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g0249 37 1974965 1976176 Lele38g0249 38 1965942 1967171 ECH
Lele38g0249 38 1965942 1967171 Lele38g0249 38 1965942 1967171 ECH
Lele38g0249 38 1965942 1967171 Lele01g0730 01 4288117 4289469 ECH
Lele38g0249 38 1965942 1967171 Lele02g0712 02 4312124 4313497 ECH
Lele38g0249 38 1965942 1967171 Lele03g0728 03 4299804 4301156 ECH
Lele38g0249 38 1965942 1967171 Lele04g0729 04 4466231 4467580 ECH
Lele38g0249 38 1965942 1967171 Lele39g1175 39 20432868 20434082 hybridization
Lele38g0249 38 1965942 1967171 Lele40g0233 40 1839986 1841170 hybridization