Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g1175 ATGGACAGGTGGAATAAATCACAACGAGATCGCCACCAAAGCCAAAGGCACTACAGAGAGAATCCATCTTTCTCTTCTACTCTTGTTGACGCCATTTATCGATCCATCGACGAAGGAGAAACAGAGGAGAAAGAAAACCAGCTTGTGCTCTACAGAGAAACCATGAAGAAGCAGAAACAGAGCAACTTGTTCAGTAACGATCATGATGACGAAGCTAAAGCATTGAGCTTTCGTCGATCTCGAAATGTCGAAAACTGGATGGACTCAAGGGTGTGCGAGAAAGTTTATGTTCGAAGAAATTCCATACATTCTAACTCAAGCTCCACAGATTCCAGCTCAAATGGCAGGTTTTCTTCTTCAGAGTCATCATCAGAGCTCTTCAATGGCGTCCAGAGGCTGAAGCCAATTCGAACCAGTGTTGCTCCTCCTCAAAAATCAAACCTTGATTCTCTAAAAGAACACAGCTGGAACTATTCTGCTCATACCCAACAGCCAAAGCCGGAAAATGGCTTCGAGAAGAAGATGACGAAATCGAAAGCTCTGAGACGAATCCTATACGGAGACCTGAAGAAATCAAAGCAACCTATTTCACCAGGTGCTAAACTCGCAAGTTTTCTGAATTCTCTCTTCAATTCTGGTGGTGGAAACAACAACAATGCCAAAAAGGAACCAAAGGTGGTGTCGTCGTCAAACACTATGGCACAACCTTCAACAACTTGTTCTTCAGCATCTTCGTTTTCAAGGTCTTGTTTGAGCAAAACCCCATCATCATCAAGATCAGCAGCGAAGGCTAACAGGTCTGTCAGATTCTGCCCAGTTAGTGTCATAGTTGATGAAGATTGCAGGCCATGTGGGCACAAGAATCTTTACGAGAAAGAAGAAAAGGGTATCGAGAAATTCAGTTATATCAGCAAGAACAACAGTAACAATGAGGAGCTAAGGTTCCATGTGATGCAGGAGAGTCGAAGAGTGGAGGAATACGCGAGAGATTTGCTGAGGAATTATGAGAAGAAGAAGAAGAAGGTTGACGATGGAATGATGCATTATGAAGAAGAAGATGATGCAGCAAGTTGTTCAAGTTCTGATCTTTTTGAATTGGAAAATCTTTCAGGAATTGGGAATAATATTGAAATATATAGAGAAGAATTGCCAGTGTATGAAACTACTCATTTCAATACCAAACGAGCCATTGCCAACAATGGCTTCATGCTGTAA 1215 0.4206 MDRWNKSQRDRHQSQRHYRENPSFSSTLVDAIYRSIDEGETEEKENQLVLYRETMKKQKQSNLFSNDHDDEAKALSFRRSRNVENWMDSRVCEKVYVRRNSIHSNSSSTDSSSNGRFSSSESSSELFNGVQRLKPIRTSVAPPQKSNLDSLKEHSWNYSAHTQQPKPENGFEKKMTKSKALRRILYGDLKKSKQPISPGAKLASFLNSLFNSGGGNNNNAKKEPKVVSSSNTMAQPSTTCSSASSFSRSCLSKTPSSSRSAAKANRSVRFCPVSVIVDEDCRPCGHKNLYEKEEKGIEKFSYISKNNSNNEELRFHVMQESRRVEEYARDLLRNYEKKKKKVDDGMMHYEEEDDAASCSSSDLFELENLSGIGNNIEIYREELPVYETTHFNTKRAIANNGFML 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g1175 404 MobiDBLite consensus disorder prediction 213 249 - -
Lele39g1175 404 Coils Coil 332 352 - -
Lele39g1175 404 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 1 402 IPR039621 GO:0009734
Lele39g1175 404 MobiDBLite consensus disorder prediction 1 23 - -
Lele39g1175 404 MobiDBLite consensus disorder prediction 1 18 - -
Lele39g1175 404 MobiDBLite consensus disorder prediction 102 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g1175 Lele-ChrLele39 20432868 20434082 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele39g1175 39 20432868 20434082 Lele40g0233 40 1839986 1841170 ECH
Lele39g1175 39 20432868 20434082 Lele39g1175 39 20432868 20434082 ECH
Lele39g1175 39 20432868 20434082 Lele01g0730 01 4288117 4289469 ECH
Lele39g1175 39 20432868 20434082 Lele02g0712 02 4312124 4313497 ECH
Lele39g1175 39 20432868 20434082 Lele03g0728 03 4299804 4301156 ECH
Lele39g1175 39 20432868 20434082 Lele04g0729 04 4466231 4467580 ECH
Lele37g0249 37 1974965 1976176 Lele39g1175 39 20432868 20434082 hybridization
Lele38g0249 38 1965942 1967171 Lele39g1175 39 20432868 20434082 hybridization