Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0729 ATGTACATGTTGGAGAAGACCCTCAGGGAACCCACATTCCCTAACCACCCTAAAAACCCCTCTTTCTCTTCCACTCTGCTCGACAAGATTTACCGATCCATCGAAGAAGGCGAGAGGGAGAAATCCGGCGATATGAAGTTCCGCAGAGAAACAACGGCGAAGAAACAGAGCAGAAGCAGTGAGAAATGTAACAGAATCGCTGAAGAGGAAGAAATAGCCAAGGCAAATCTTCGCAGAGCTTGTTTGATAGAGAAATGGATGGACAAAAAGGTGGTGAGCGAAAAGGTCGGCGCCAAGAGGACTCACCACCTGGACACAAAACTACATCTTGAGCATGATCACGACCAAGATGTTCTGTTTTTCAGTTCCACTTCGAGTTCTTCTGATTCCAGTTCTGGAGGATTCTCTTCATCTGACACTGAGTCCATGTCCGGAGTGAGATCACAGTCCTCGTGCTTTGCGCCACCGAGGCCTAAGCCAGTGAAGACCAGTGTGTCAGTCAGGTCTGATAGATCAGAGAAGAAAGATAGAGGACAAAAACAGAGGGAAGCGCGTGCTTATGATGTACATGAGGAAGGATTAATAAAGAGCAAATCCAGGGCTCTCAAGATTTACGAGAATATTAAGAAAGCAAAGCAACCGATTTCTCCAGGTGGAAAGCTCAAGAATTTTCTCAACGCTCTGTTTACACCAGGGAATACAAAGAAAAGCAAGAGCTCGAGCATATGCTCTGTTGGAGGCTGCGAAGACGTAAACGCTGAGAGGAAATTCAAGTCAGGTCAAGCTTCAACATGTTCATCGGCGTCTTCATTCTCACGGTCTTGCCTGAGCAAAACCTCGTCTTCTTTGCGTAAAGATGATAAGAGAACCGTGCGTTTTTACCCAGTAAGCGTGATCGTGGGTGAAGACAGTCGACCATGCGGGCATAAATGCTTGTACAAAGAAGAAGACGCTAGTATAATGCCCGTGTCGGTGCCGACCGCCTGGAAAATCGGAGGGTCACCAGCTTGTAAGAAGAACATTGGTGAAGAACTCAAAGTCACAGTCATGGAGAAGAGCAGGCGAGTGGAAGAAGCTGCCAGAGAGTTCCTGAAAGAGTATCATCAAAACCAGAGGAAAAGCGATTTGGTTTTGAGGGATTTTCCCATTAGGACAAATGTAGTCGAAGAAGAAGAAGATGACGCAGATGAATACGACGACGACGATGCAGCAAGCTATGCAAGTTCAGATCTTTTCGAGCTTGATCACTTGGCGGTCATGGGAGACACTAGGTACAGTGAAGAGCTTCCAGTGTATGAGACAACTCATGTTAGTACAAATCGCGCCATTGCTAATGGCCTCATAATGTAG 1350 0.4652 MYMLEKTLREPTFPNHPKNPSFSSTLLDKIYRSIEEGEREKSGDMKFRRETTAKKQSRSSEKCNRIAEEEEIAKANLRRACLIEKWMDKKVVSEKVGAKRTHHLDTKLHLEHDHDQDVLFFSSTSSSSDSSSGGFSSSDTESMSGVRSQSSCFAPPRPKPVKTSVSVRSDRSEKKDRGQKQREARAYDVHEEGLIKSKSRALKIYENIKKAKQPISPGGKLKNFLNALFTPGNTKKSKSSSICSVGGCEDVNAERKFKSGQASTCSSASSFSRSCLSKTSSSLRKDDKRTVRFYPVSVIVGEDSRPCGHKCLYKEEDASIMPVSVPTAWKIGGSPACKKNIGEELKVTVMEKSRRVEEAAREFLKEYHQNQRKSDLVLRDFPIRTNVVEEEEDDADEYDDDDAASYASSDLFELDHLAVMGDTRYSEELPVYETTHVSTNRAIANGLIM 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0729 449 MobiDBLite consensus disorder prediction 1 24 - -
Lele04g0729 449 MobiDBLite consensus disorder prediction 121 151 - -
Lele04g0729 449 MobiDBLite consensus disorder prediction 37 63 - -
Lele04g0729 449 MobiDBLite consensus disorder prediction 164 190 - -
Lele04g0729 449 MobiDBLite consensus disorder prediction 121 190 - -
Lele04g0729 449 PANTHER PROTEIN BIG GRAIN 1-LIKE A-RELATED 9 449 IPR039621 GO:0009734
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0729 Lele-ChrLele04 4466231 4467580 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0729 04 4466231 4467580 Lele04g0729 04 4466231 4467580 ECH
Lele03g0728 03 4299804 4301156 Lele04g0729 04 4466231 4467580 ECH
Lele37g0249 37 1974965 1976176 Lele04g0729 04 4466231 4467580 ECH
Lele38g0249 38 1965942 1967171 Lele04g0729 04 4466231 4467580 ECH
Lele39g1175 39 20432868 20434082 Lele04g0729 04 4466231 4467580 ECH
Lele40g0233 40 1839986 1841170 Lele04g0729 04 4466231 4467580 ECH
Lele01g0730 01 4288117 4289469 Lele04g0729 04 4466231 4467580 hybridization
Lele02g0712 02 4312124 4313497 Lele04g0729 04 4466231 4467580 hybridization