Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1135 ATGACCTCGTCTCTGGGGATGATGGTGGAAGAGACTAAGCTCGTGCAGAAGCAGGGCATAGTCACTATTCTGAGCTCTGACTGTGAGAGGAACAGAGCTTCTTCTTTTTCTTCTTCCCTGCGACGTACTCTATCTGCAGACATGTCCTCTAAGAAATGGCTCTCTCAAAATGGGTTCTTCTCTCCCATGAAGAAGACTGTTTCATCCCAGAAGCTCTCACTTTCTGCTGCTGACTCCTGCTCCTCGTCTGAATCAGAATCATCAGATGATGGCGAAGAAAGGAAAGATCTGGAGGCTGAGAGTATTTGGAGCGCAATCCAAAAAGACAAAAACAAGGGGAGTGAGAAGCCCGGAGCGTTTGACATCTGGAGCTCCATTGTGTCCCAGAAAACCAACGAGGATGCCTCCAAATCATCCCTACCTCCTCCTTATATTCATCCACTTGTGAAAAGATCACAAAGCTCCCTGAGTGAGAAAAGCCTCGAGATTTGCACAGAGAGACTTGGATCCGAAACAGGGTCCGATGGGTTCTCTTCATACCCGTCATCTGAGACCGGAGAAACAGAGGAAAATAAGGATGATGAAGAAGAAGAGGAGGAGGAAGAAACAGAGAAAGAGACACTCCAACAAGAACATGCTGAGCCAGAGGAGGATTTCGTTGTGCCAAAATTCAATTACTCTGCAACTTCCAAGAAAGCTGGGCCTCGTTCTTTCCCTCCTCCCCTTCCTTCTCTAACTCGTCCAGATGGACCTTCTGTTCACATGAGGTCCCGCCGTGAAAATGGAAGGCTTGTCCTCGAAGCTGTCTCCGTTCCTTCTCAGAACAACTTCTGTGCTCGTCGCCAAGATGGTCGCCTTCTCCTAACTTTCAATAATCTTGCCACCAACGAACAATTCCAGCACGATGAAGAACCGGACGAAGAAGAATACGACGTGGACGTAGAGGAGATGGAAGAAGAGTTCGGGGAGTTTGAGAAAGATAATGAAGAAGAGAGTGAACATGAGGAGGATGACGATGAGGAAAGAGAAGAGGAAGAGATTGACAAAAGTGATACACAACAGGCACCGATATTATCTAGTAGGGTTGAAAGTGTGTATAGGCTAGGATTAACCATGAATAAGCCAACTGGGTTTGTGAATAGGAATCCAAAGGGGTCGGAGAAGTTGAACGAGGTAGTGAATTCGGAGGATGTTAAGGTTGCAGAGAAAAGTACTACGGCGGCGAAATCATCACTTCCACCAAGGCCAAGGGTGGCTCGACTGGTCCCATCATCAGCACCGGCGGTGGCAAATTCTGCAGCAGCAGCAGTATCATCTTTCAATCGTTATGAATACTTCTGGAGACCCAAATCCACAAACCATCCCCAGAATAACTCACCAGGGAAGCACTATAACAGTAGCAAGCGTAGTGTCTGTGAGGCAATTAATCAAACACCTCAAGAGCAACAGAAATTGATGGTTCTGAAAGGTAAAAATGGTGATTCCTTGGTTCACAATTGGAGGAGTTGCAAGGAGTCTAGAAGATCCTTACCATTCTGGGAACCCCATTGCATTGCCACATCCTGA 1566 0.4693 MTSSLGMMVEETKLVQKQGIVTILSSDCERNRASSFSSSLRRTLSADMSSKKWLSQNGFFSPMKKTVSSQKLSLSAADSCSSSESESSDDGEERKDLEAESIWSAIQKDKNKGSEKPGAFDIWSSIVSQKTNEDASKSSLPPPYIHPLVKRSQSSLSEKSLEICTERLGSETGSDGFSSYPSSETGETEENKDDEEEEEEEETEKETLQQEHAEPEEDFVVPKFNYSATSKKAGPRSFPPPLPSLTRPDGPSVHMRSRRENGRLVLEAVSVPSQNNFCARRQDGRLLLTFNNLATNEQFQHDEEPDEEEYDVDVEEMEEEFGEFEKDNEEESEHEEDDDEEREEEEIDKSDTQQAPILSSRVESVYRLGLTMNKPTGFVNRNPKGSEKLNEVVNSEDVKVAEKSTTAAKSSLPPRPRVARLVPSSAPAVANSAAAAVSSFNRYEYFWRPKSTNHPQNNSPGKHYNSSKRSVCEAINQTPQEQQKLMVLKGKNGDSLVHNWRSCKESRRSLPFWEPHCIATS 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1135 521 Coils Coil 307 334 - -
Lele31g1135 521 Coils Coil 185 211 - -
Lele31g1135 521 MobiDBLite consensus disorder prediction 450 469 - -
Lele31g1135 521 MobiDBLite consensus disorder prediction 75 118 - -
Lele31g1135 521 MobiDBLite consensus disorder prediction 449 469 - -
Lele31g1135 521 MobiDBLite consensus disorder prediction 131 255 - -
Lele31g1135 521 MobiDBLite consensus disorder prediction 87 116 - -
Lele31g1135 521 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 38 520 IPR021410 -
Lele31g1135 521 MobiDBLite consensus disorder prediction 171 185 - -
Lele31g1135 521 MobiDBLite consensus disorder prediction 295 360 - -
Lele31g1135 521 MobiDBLite consensus disorder prediction 188 205 - -
Lele31g1135 521 Pfam Fantastic Four meristem regulator 237 290 IPR046431 -
Lele31g1135 521 MobiDBLite consensus disorder prediction 29 49 - -
Lele31g1135 521 MobiDBLite consensus disorder prediction 301 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1135 Lele-ChrLele31 17977690 17979255 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1035 09 19522251 19524665 Lele31g1135 31 17977690 17979255 CCT
Lele29g0410 29 2504802 2506349 Lele31g1135 31 17977690 17979255 hybridization
Lele30g1002 30 13462802 13464704 Lele31g1135 31 17977690 17979255 hybridization