Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0410 ATGACCTCGTCTCTGGGGATGATGGAGGAAGAGACTAAGCTCGTGCAGAAGCAGGGCATAGTCACTATTCTGAGCTCTGACTGTGAGAGGAACAGAGCTTCTTCTTTTTCTTCTTCCCTGCGACGTACTCTATCTGCAGACATGTCCTCTAAGAAATGGCTCTCTCAAAATGGGTTCTTCTCTCCCATGAAGAAGACTGTTTCATCCCAGAAGCTCTCACTTTCTGCTACTGACTCCTGCTCCTCGTCTGAATCAGAATCATCAGATGATGGGAAAGATCTGGAGGCTGAGAGTATTTGGAGAGCAATCCAAAAAGACAAAAGCAAGGGGAGTGAGAAGCCCGGAGCGTTTGACATCTGGAACTCCATTGTGTCCCAGAAAACCCACGAGGATGCCTCCAAATCATACCTACCTCCTCCTTATATTCACCCACTCGTGAAAAGATCACAAAGCTCCCTGAGTGAGAAAAGCCTCGAGATTTGCACAGAGAGACTCGGATCCGAAACAGGGTCCGATGGGTTCTCTTCATACCCGTCATCTGAGACCGGAGAAACAGAGGAAAATAAGGATGATGAAGAAGAGGAGGAGCAAGAAACAGAGAAAGAGACACTCCAACAAGAACATGCTGAGCCAGAGGAGGATTTCGTTGTGCCAAAATTCAATTACTCTGCAACTTCCAAGAAAGCTGGTCCTCGTTCTTTCCCTCCTCCCCTTCCTTCTCTAACTCGTCAAGATGGGCCTTCTGTTCACATGAGGTCCCGCCGTGAAAATGGAAGGCTTGTCCTCGAAGCTGTCTCCTTTCCTTCTCAGAACAACTTCTGTGCTCGTCGCCAAGATGGTCGCCTTCTCCTCACTTTCAATAATCTTGCCACCAACGAAGAATTCCAGCACGATGAAGAAGCGGACGAAGAAGAATACGACGTGGACGTAGAGGAGATGGAAGAAGAGTTCGGGGAGTTTGAGAAAGATAATGAAGAAGAGAGTGAACATGAGGAGGATGACGTTGGGGAAAGAGAAGAGGAAGAGATTGACAAAAGTGATACACAACAGGCACCGATATTATCTAGTAGGGTTGAAAGTGTGTATAGGCTAGGATTAACTATGAATAAGCCAACTGGGTTTGTGAATAGGAATCCAAAGTGGTCGGAGAAGTTGAACGAGGTGGTGAATTCGGAGGATGTTAAGGTTGCAGAGAAAAGTACCACGGCGGCGAAATCATCACTTCCACCAAGGCCAAGGGTGGCTCGACTGGTCCCATCATCAGCACCGGCGGTGGCAAATTCTGCAGCAGCAGCATATTTCAATCGTTATGAATACTTCTGGAGACCCAAATACACAAACCATCCCCAGAATAACTCACCAGTGAAGAACTATAACAGTAGCAAGCGTAGTGTCTGTGAGGCAATTAATCAAACACCTCAAGAGCAACAAAAATTGATGGTTCTGAAAGGTAAAAATGGCGATTCCTTGGTTCACAATTGGAGGAGTTGCAAGGAGTCTAGAAGATCCTTACCATTCTGGGAACCCCATTGCATTGCCACATCCTGA 1548 0.4683 MTSSLGMMEEETKLVQKQGIVTILSSDCERNRASSFSSSLRRTLSADMSSKKWLSQNGFFSPMKKTVSSQKLSLSATDSCSSSESESSDDGKDLEAESIWRAIQKDKSKGSEKPGAFDIWNSIVSQKTHEDASKSYLPPPYIHPLVKRSQSSLSEKSLEICTERLGSETGSDGFSSYPSSETGETEENKDDEEEEEQETEKETLQQEHAEPEEDFVVPKFNYSATSKKAGPRSFPPPLPSLTRQDGPSVHMRSRRENGRLVLEAVSFPSQNNFCARRQDGRLLLTFNNLATNEEFQHDEEADEEEYDVDVEEMEEEFGEFEKDNEEESEHEEDDVGEREEEEIDKSDTQQAPILSSRVESVYRLGLTMNKPTGFVNRNPKWSEKLNEVVNSEDVKVAEKSTTAAKSSLPPRPRVARLVPSSAPAVANSAAAAYFNRYEYFWRPKYTNHPQNNSPVKNYNSSKRSVCEAINQTPQEQQKLMVLKGKNGDSLVHNWRSCKESRRSLPFWEPHCIATS 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0410 515 MobiDBLite consensus disorder prediction 185 200 - -
Lele29g0410 515 MobiDBLite consensus disorder prediction 85 113 - -
Lele29g0410 515 MobiDBLite consensus disorder prediction 201 215 - -
Lele29g0410 515 Coils Coil 182 207 - -
Lele29g0410 515 MobiDBLite consensus disorder prediction 29 49 - -
Lele29g0410 515 MobiDBLite consensus disorder prediction 168 182 - -
Lele29g0410 515 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 38 514 IPR021410 -
Lele29g0410 515 MobiDBLite consensus disorder prediction 74 251 - -
Lele29g0410 515 MobiDBLite consensus disorder prediction 294 354 - -
Lele29g0410 515 Coils Coil 296 330 - -
Lele29g0410 515 MobiDBLite consensus disorder prediction 296 341 - -
Lele29g0410 515 Pfam Fantastic Four meristem regulator 233 286 IPR046431 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0410 Lele-ChrLele29 2504802 2506349 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1035 09 19522251 19524665 Lele29g0410 29 2504802 2506349 CCT
Lele29g0410 29 2504802 2506349 Lele31g1135 31 17977690 17979255 hybridization
Lele29g0410 29 2504802 2506349 Lele32g0389 32 2455642 2457219 hybridization