Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1035 ATGTACTCTCGCCCATCTGTTCTCACTTTCGCTCTTCTCCTTTCTCTCTCTATCGTCTTCTTACTCGCCCCTCGTATCCTTCCCCCTCGCCCCATTTCCGTCCCCATTTCCCTCGACGACGAACTTGATGACCTCTCTCTCTTCAATCGTGCCGCTTCTCTCTCTTCTTCTTCCATCGCGAATAATCCCTCCAAAGTTTTCCATCTTTCTTCCTCTAAAAATCCAAAGCTTAAACTTGCCTTTCTCTTCCTCACAAACTCTGACCTACATTTTGCTCCTCTTTGGGATCGCTTCTTCGACGGCACCTCCACCAATCTGTACAACATCTACGTTCATGCGGATCCCACTGTGAATGTCACGCGCCCCTCTAGTGGTGTTTTCCGAGGGCGATTTATCCCGGCGAAGCGAACCTACCGTGCGTCTCCCACACTCATCTCTGCGACGCGCCGACTTCTGGCAACTGCTCTCCTCGATGATCCTGCCAATGCTTACTTTGTTGTCCTCTCCCAATACTGTATACCTCTTCATTCTTTCAGATATGTGCATCGTTCCCTGTTTGTATCTTCTACATTCGATCTGACCTCACCTGAATCCGATCCCGACTTGTCTCGCCTGGGTTTTCGGGAGAGGTACCGGAGTTTCATTGAGATAATCTCTGATGAGCCCCGTCTTTGGAAGCGATACATTGCCAGAGGTCGATTTGCGATGACTCCGGAGGTGTCATTTGAACAATTCCGTGTGGGATCTCAGTTTTTCGCGCTCACTCGACGGCATGCGTTGGTGGTGATCAAAGATCGCGCCCTATGGAGGAAATTTAAAATACCCTGTTATGACAATTGCTACCCTGAAGAACATTATTTTCCTACCTTGTTGTCAATGGCGGATCCCGATGGTTGCACCAAATACACGCTGACGCGAGTTAATTGGACTGGTACAGTGAATGGCCACCCTCATACGTACCGGCCTGCCGAAGTATCAAAAGAGCTTATTTATCGACTACGGGAATCAAATCAGTCAGATTCTTATTTGTTTGCCCGAAAATTTGCCTCTGATAGCTTGCAGCCATTGATGCGGCTAGCTAAATCATCTATCGATTTGGCCTCTTCCCCAGGTGGATGCTTTGTTCACATTGTCGGTGTGGATACCTTAAATTATATATTTGAATCACGGGTGGATGCTTTGTTCACATTGTCAAACTATCCCCAGTTATCTTTAGGATCTTGTCGGAGGGTGGAAATAAAAGCAATTGAAGAACCATTAGTGCTAAGCAAGCTTTATGATAGGGTTATGAGACATTGTAGAATATCAGGGAAGAATCTTAAGTATGGCGAGCTAGTTTTGCCTAGTGTTGCAGAAGTTCGATGTGGCATATATGGTTTGAAGAGGCATGGACAGCCCACAACCTTGTATATTCCCCAGAACACTCCAACCGATGAGGAATCAAAAGGAGGAAACAAAGAAACAGATAGGCCCCTCCGTGAGTTCAAAATGAAAGGCAGTAAATGTAGACAAGTGTATAATAGTTCGATGTTGCGGATTACGTTGAAAAGGGTTCAGCAAGAAGCAACTATCAAAGGAAAAATGAAAGCTTTGCTTTCCTTCTCCATGCTTCAACCAGTTGGCTTGCTAGGGTTACATTGA 1641 0.4607 MYSRPSVLTFALLLSLSIVFLLAPRILPPRPISVPISLDDELDDLSLFNRAASLSSSSIANNPSKVFHLSSSKNPKLKLAFLFLTNSDLHFAPLWDRFFDGTSTNLYNIYVHADPTVNVTRPSSGVFRGRFIPAKRTYRASPTLISATRRLLATALLDDPANAYFVVLSQYCIPLHSFRYVHRSLFVSSTFDLTSPESDPDLSRLGFRERYRSFIEIISDEPRLWKRYIARGRFAMTPEVSFEQFRVGSQFFALTRRHALVVIKDRALWRKFKIPCYDNCYPEEHYFPTLLSMADPDGCTKYTLTRVNWTGTVNGHPHTYRPAEVSKELIYRLRESNQSDSYLFARKFASDSLQPLMRLAKSSIDLASSPGGCFVHIVGVDTLNYIFESRVDALFTLSNYPQLSLGSCRRVEIKAIEEPLVLSKLYDRVMRHCRISGKNLKYGELVLPSVAEVRCGIYGLKRHGQPTTLYIPQNTPTDEESKGGNKETDRPLREFKMKGSKCRQVYNSSMLRITLKRVQQEATIKGKMKALLSFSMLQPVGLLGLH 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1035 546 Pfam Core-2/I-Branching enzyme 211 333 IPR003406 GO:0016020|GO:0016757
Lele09g1035 546 Pfam Core-2/I-Branching enzyme 79 188 IPR003406 GO:0016020|GO:0016757
Lele09g1035 546 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 18 358 IPR044174 GO:0016757
Lele09g1035 546 MobiDBLite consensus disorder prediction 472 494 - -
Lele09g1035 546 MobiDBLite consensus disorder prediction 480 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1035 Lele-ChrLele09 19522251 19524665 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1035 09 19522251 19524665 Lele29g0410 29 2504802 2506349 CCT
Lele09g1035 09 19522251 19524665 Lele30g1002 30 13462802 13464704 CCT
Lele09g1035 09 19522251 19524665 Lele31g1135 31 17977690 17979255 CCT
Lele09g1035 09 19522251 19524665 Lele32g0389 32 2455642 2457219 CCT
Lele09g1035 09 19522251 19524665 Lele11g1037 11 17547103 17548206 hybridization