LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele30g1002	ATGGCCATCATCATCCACAGCCATTCCCAACAACCTCATCAGCTTCATCATCACCTTCCTTCTTCCTTTCCTCTGCAACTCGCACTCACAGTGGTCTCTCAGAAGACCTCTATAAGTAGTTGCGTGTACTTCTCCTTTGAGTTATTGGAGATGTCTGCTCAGGGTTTAATGTCCTCGTCTCTGGGGATGAAGATGGAGGAAGAGACTAAGCTCGTGCAGAAGCAGGGCATAGTCACTATTCTGAGTTCTGACTGTGATAGGAACAGAGCTTCTTCTTCCCTGCGACGCACTCTATCTGCAGACATGTCCTCTAAGAAATGGCTCTCTCAAAATGGGTTCTTCTCTCCCATGAAGAAGGCTTTTTCATCCCAGAAGCTCTCACATTCTGCTGCTGACTCGTGCTCCTCGTCGTCTGAATCAGAATCATCAGATGACGGCGAAGAAAGGAAAGATCTGGAGGCTGAGAGTATTTGGAGCGCAATCCAAAAAGACAAAAACAAGGAGAGTGAGAAGCCCGCAGCGTTTGACATCTGGAGCTCCATTGTGTCCCAGAAAACCAACGAGGATGCCTCCAAATCATCCGTACCTCCTCCTTATATTCACCCACTTGTGAAAAGATCACAAAGCTCTCTGAGTGAGAAAAGCCTCGCGATTTGCACAGAGAGCCTAGGATCGGAAACAGGGTCCGATGGGTTCTCTTCATACCCGTCATCTGAGACCGGAGAAACAGGGGAAGAGAAGGATGAAGAAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAACAGAGAAAGAGACACTCCAGCAAGAACATGCTGAGCCAGAGGAGGATTTCGTTGTGCCAAAATTCAATTACTCTGCAACTTCCAAGAAAGCCGGTCCTCGTTCTTTCCCTCCTCCCCTTCCTTCTCTAACACGTCAAGATGGACCTTCTGTTCACATGAGGTCCAGCCGCGAAAATGGAAGGCTTGTCCTCGAAGCTGTCTCCGTTCCTTCTCAGAACAACTTCTGTGCTCGTCGCCAAGATGGTCGCCTTCTCCTCACTTTCAACAACCTTGCTACCAAAGAAGAATTCCAGCAACATGAAGATGACGATGAAGAACCAGACGAAGAAGAATACGATGTGGACGTAGAGGAGATGGAAGAAGAGTTCGGGGAGTTTAAGAAAGATGATTATGAAGAAGAGAGTGAACATGAAGAGGATGACGATGAGGAAAGAGAGGAGGAAGAGATTGACAAAAGTGAGACAGAACAAGCACCAATATTATCTAGTAGAGTTGAAAGTGTGTATAGGTTAGGAATAACCATGAATAAGCCAATTAGGTTTGTGAATAGGAACCCAAAGTGGTCGGAGAAGTTGAACGAGTTGGTGAATTCGGAGGATGTTAGGGTGGCAGAGAAAAGCACCACGTCGGCAAAATCATCACTTCCACCTAGGCCAAGGGTGGCTCGACTGGTCCCATCAGCACCGGCGGTGGCAAATTCTGCAGCAGCAGCAGTATCATCATTCAATCCTTATGAATACTTCTGGAGAGCCAAATCCACAAATCATCCCCAGAATAACTCACCATCACCAGTGAAGAACAATAACAGTAACAAGCGTAGTGTCAGTGAGGCAATTAATCAAACACCTCAAGAGCAACAGAAATTGCTGGTTCTGAAAGGTAAACATGGTGATTACTTGGTTCACAATTGGAGTAGTTGCAAGGAGTCTAGAAGATCCTTACTATTCTGGGAACCTCGTTGCATTGCCACATCTTGA	1758	0.463	MAIIIHSHSQQPHQLHHHLPSSFPLQLALTVVSQKTSISSCVYFSFELLEMSAQGLMSSSLGMKMEEETKLVQKQGIVTILSSDCDRNRASSSLRRTLSADMSSKKWLSQNGFFSPMKKAFSSQKLSHSAADSCSSSSESESSDDGEERKDLEAESIWSAIQKDKNKESEKPAAFDIWSSIVSQKTNEDASKSSVPPPYIHPLVKRSQSSLSEKSLAICTESLGSETGSDGFSSYPSSETGETGEEKDEEEEQEEEEEEETEKETLQQEHAEPEEDFVVPKFNYSATSKKAGPRSFPPPLPSLTRQDGPSVHMRSSRENGRLVLEAVSVPSQNNFCARRQDGRLLLTFNNLATKEEFQQHEDDDEEPDEEEYDVDVEEMEEEFGEFKKDDYEEESEHEEDDDEEREEEEIDKSETEQAPILSSRVESVYRLGITMNKPIRFVNRNPKWSEKLNELVNSEDVRVAEKSTTSAKSSLPPRPRVARLVPSAPAVANSAAAAVSSFNPYEYFWRAKSTNHPQNNSPSPVKNNNSNKRSVSEAINQTPQEQQKLLVLKGKHGDYLVHNWSSCKESRRSLLFWEPRCIATS	585

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele30g1002	585	MobiDBLite	consensus disorder prediction	359	413	-	-
	Lele30g1002	585	MobiDBLite	consensus disorder prediction	243	263	-	-
	Lele30g1002	585	MobiDBLite	consensus disorder prediction	130	152	-	-
	Lele30g1002	585	Pfam	Fantastic Four meristem regulator	295	348	IPR046431	-
	Lele30g1002	585	MobiDBLite	consensus disorder prediction	205	240	-	-
	Lele30g1002	585	MobiDBLite	consensus disorder prediction	355	421	-	-
	Lele30g1002	585	Coils	Coil	388	408	-	-
	Lele30g1002	585	PANTHER	FANTASTIC FOUR-LIKE PROTEIN (DUF3049)	91	584	IPR021410	-
	Lele30g1002	585	Coils	Coil	240	272	-	-
	Lele30g1002	585	MobiDBLite	consensus disorder prediction	185	315	-	-
	Lele30g1002	585	MobiDBLite	consensus disorder prediction	513	542	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele30g1002	Lele-ChrLele30	13462802	13464704	Dispersed/Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele09g1035	09	19522251	19524665	Lele30g1002	30	13462802	13464704	CCT
	Lele30g1002	30	13462802	13464704	Lele31g1135	31	17977690	17979255	hybridization
	Lele30g1002	30	13462802	13464704	Lele32g0389	32	2455642	2457219	hybridization