Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1316 ATGACTGCGGTTTCTTTGCTTATGATATTGACTGCACTGGCAGTTAGTTCAGCGGTCGAGTCCTGCCCTCCCTCCGAATGGGCTGCTCTCATGGCCTTCAAGGCTTCCTTGAGTGAGCCCTACGTCGGAATCTTTCGTTCCTGGAGAGGCACTAACTGTTGCTACCGCTGGTACGGCGTCCACTGCGACCCCACCACTCTCCGCGTCGTCGACATCACTCTAGGCGGCCTCCTTGACGACCCAGTCTTCAAGCACCTCAACCGCACCGGCTACATGTCCGGTTCCATCTCCCCTTCCATATGCCACCTCTCCCAACTCTCCACGCTCTCCATCTCCAACTTGAAGGCCATTTCGGGCCCCATCCCTCGCTGCATCCCTTCCTCCTTGACTTTTCTCCAAATCCTCGATCTCTCCGGCAACGTCTTATCTGGAAACATCCCCCACGACATTGGGCGGCTCCGCCAGCTCACCATGCTCAACCTCGCTGACAATCATCTCTCCGGGAGGATCCCCGGCAGTCTGGTGAATCTCTCCAGTTTAACGCACCTTGACCTCAGAAACAACGCACTTGAGGGTCCCATTCCGCGAGACGTTGACAGGCTCCGAATGCTGAACCGGGCTTTGTTGAGCCACAATCGGCTCACGGGTCCGATCCCCTGGAAGATATCGAGAATATATCGGCTGGCGGATTTGGACCTGTCTCTGAATCAAATATCGGGGCGGATTCCGGAGTCGTTGGGCACAATGCCGGTTCTGGATACGCTGAAGTTGAAGTATAATAAGATAAGAGGGGGTGTGCCGGCGAGTTTGCTGAGTTCAAGAATGAGCCATATAGATTTGAGCAGAAACGAGCTAGCGGGGCATATAGCAGACGTATTTCACGAAGGAACGTATTTTATAAATCTGGATTTATCGCACAACAAATTGAGGGGCAGTATACCCAAGTCGATGAAGTTGGCCAGGTATATTGGTCACTTGGATTTGAGTCACAACCATCTTTGTGGCCGCATTCCAAATGTTTCACCTTTTAATCATCTCGATGCCTCCTCCTTCCGTAACAATCGATGTCTACGTGGAAGCCCCCTTAAACCTTGCTGA 1098 0.5264 MTAVSLLMILTALAVSSAVESCPPSEWAALMAFKASLSEPYVGIFRSWRGTNCCYRWYGVHCDPTTLRVVDITLGGLLDDPVFKHLNRTGYMSGSISPSICHLSQLSTLSISNLKAISGPIPRCIPSSLTFLQILDLSGNVLSGNIPHDIGRLRQLTMLNLADNHLSGRIPGSLVNLSSLTHLDLRNNALEGPIPRDVDRLRMLNRALLSHNRLTGPIPWKISRIYRLADLDLSLNQISGRIPESLGTMPVLDTLKLKYNKIRGGVPASLLSSRMSHIDLSRNELAGHIADVFHEGTYFINLDLSHNKLRGSIPKSMKLARYIGHLDLSHNHLCGRIPNVSPFNHLDASSFRNNRCLRGSPLKPC 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1316 365 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 6 113 - -
Lele30g1316 365 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 196 289 - -
Lele30g1316 365 Gene3D Ribonuclease Inhibitor 24 198 IPR032675 -
Lele30g1316 365 Gene3D Ribonuclease Inhibitor 275 365 IPR032675 -
Lele30g1316 365 SUPERFAMILY L domain-like 21 364 - -
Lele30g1316 365 FunFam Nuclear pore complex protein NUP107 24 195 - -
Lele30g1316 365 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Lele30g1316 365 Pfam Leucine Rich Repeat 179 199 IPR001611 GO:0005515
Lele30g1316 365 Gene3D Ribonuclease Inhibitor 199 273 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1316 Lele-ChrLele30 15524948 15526045 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1316 89 365 Receptor kinase-like Gene Family AT4G08850 30.065 1.71e-36 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1270 11 19614064 19617863 Lele30g1316 30 15524948 15526045 CCT
Lele12g0052 12 512419 516194 Lele30g1316 30 15524948 15526045 CCT
Lele30g1316 30 15524948 15526045 Lele31g1468 31 20068510 20069607 hybridization