Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0080 ATGACTGCGGTTCCTTTGCTTATGATAGTGACTGCATTGGCAGTTAATTCAGTGGTCCAGTCCTGCCCTCCTTCTGAATGGGCTGCTCTCATGGCCTTCAAGGCTTCCTTGAGTGAGCCCTACGTCGGAATCTTCCGTTCCTGGAGAGGCACCAACTGTTGCTACCGCTGGTACGGCGTCCACTGCGACCCCACCACTCGCCGCGTCGTCGACGTCACCCTCCGCGGCCTCCTCGACGACCCCGTCTTCAAGCACCTCAACCGCACCGGCTACATGTCCGGTTCCATCTCCCCCTCCATCTGCAACCTCTCCCAACTCTCCACCCTCTCCGTCTCCGACTGGAAGGCCATTTCCGGCCCCATCCCTCCCTGCATCCCTTCCTCCTTGCCTTTTCTCCAAATCCTCGATATCTCCGGCAACGTCTTGTCTGGTAACATCCCCCACGACATTGGGAGGCTCCGCCAGCTCACCATGCTCAACCTCGCCGACAATCATCTCTCCGGTAGACTCCCCGGCAGTCTGGTGAATCTCTCCACTTTAACGCACCTTGACCTCAGAAACAACGAGCTGGAGGGTCCCATTCCGCGAGACATGGACAGGCTCCGAATGCTGAACCGGGCTTTGTTGAGCCACAATCGGCTCACGGGCCCGATCCCCTGGACGATATCGAGAATATATCGGCTGGCGGATTTGGACCTATCTCTGAATCAAATATCGGGGCGGATTCCGAAGGCGCTGGGCACAATGCCGGTTCTTGATACGCTCAAGTTGAAGTATAATAGGATAAGAGGGGGTGTACCGGCGAGTTTGCTGAGTTCAAGAATGAGCCATATGGATTTGAGGGGAAACGAGCTAGTGGGGCATATAGCTGACGTATTTCACGAAGGAACGTATTTTATAAATCTGGATTTATCGCACAACAAATTAAGAGGCAGTATACCCAAGTCCATGAAGTTGGCCAAGTATATTGGTCACTTGGATTTGAGTAACAACCATCTCTGTGGCCGCATTCCAAGGGGTTCGCCTTTTAATCATCTCGATGCCTCCTCCTTCCATAACAATCCATGTCTATGCGGAAGCCCCCTAAAACCTTGCTGA 1098 0.5373 MTAVPLLMIVTALAVNSVVQSCPPSEWAALMAFKASLSEPYVGIFRSWRGTNCCYRWYGVHCDPTTRRVVDVTLRGLLDDPVFKHLNRTGYMSGSISPSICNLSQLSTLSVSDWKAISGPIPPCIPSSLPFLQILDISGNVLSGNIPHDIGRLRQLTMLNLADNHLSGRLPGSLVNLSTLTHLDLRNNELEGPIPRDMDRLRMLNRALLSHNRLTGPIPWTISRIYRLADLDLSLNQISGRIPKALGTMPVLDTLKLKYNRIRGGVPASLLSSRMSHMDLRGNELVGHIADVFHEGTYFINLDLSHNKLRGSIPKSMKLAKYIGHLDLSNNHLCGRIPRGSPFNHLDASSFHNNPCLCGSPLKPC 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0080 365 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 197 289 - -
Lele29g0080 365 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 128 196 - -
Lele29g0080 365 Pfam Leucine Rich Repeat 180 197 IPR001611 GO:0005515
Lele29g0080 365 Gene3D Ribonuclease Inhibitor 86 365 IPR032675 -
Lele29g0080 365 Gene3D Ribonuclease Inhibitor 20 85 IPR032675 -
Lele29g0080 365 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 4 112 - -
Lele29g0080 365 SUPERFAMILY L domain-like 21 364 - -
Lele29g0080 365 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0080 Lele-ChrLele29 477770 478867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0080 150 360 Receptor kinase-like Gene Family AT5G01890 30.332 5.81e-24 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1270 11 19614064 19617863 Lele29g0080 29 477770 478867 CCT
Lele12g0052 12 512419 516194 Lele29g0080 29 477770 478867 CCT
Lele29g0080 29 477770 478867 Lele31g1468 31 20068510 20069607 hybridization