Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g1489 ATGATGACGACGACGATACCGTGTCTGGTTCTCTCGGAGGTTGAAGAAGGGAGTAAGGAATGGAGCGCTATGAGCAGGAAAGTGAGAGAGGCGTGCGAGACTCATGGCTGCTTCGTGCTTCTGCACAACAGAACCAGTTTGGTTAGGTTACAGGAAGAAATGTTGAGCGCCATGAAAGCTCTCTTTGATCTTCCTGAAGAGACCAAGATGAAGCACACTAGCCCTAAGCCTTACCGGAGCTACCATGCCAACTGCCCCATCATTCCTCTTCTTCAGAGCTTCGGCGTCGACGACGCTCCTCAACCTCTCACTGCTCAAGCTTTCACTCGCCTCATGTGGCCTCACGGCAACCCCGCTTTCTGCGAGACAATGAAGTCAATGAGCGAGGAGATGCTGGAGCTGAACTTCGTGCTGATGAAAATGATCGTGGAGGGTCTGGGCCTTCCGAAACACTACATCTCAGACGTGGAGAAGATGAAGAGCACAAGTAATTTCAGGATGATAAAGTATAGAGCACCTTTTTCTTCATCTTCTTCCTCAAGCGTCCAAGACCTAGAGACCGGTCTCGTGCCTCACACCGACAAATGCGCCATAACCACACTCTGTCAGAACGATGTCCAGGGACTCCAAGTCCTCACCAAACAAGGCCATTGGATCGATGTGAACGTTCCCCGGCATGGCCTCGTCGTCTTCGTCGGGGATATCCTCAAGGGTTGGAGCAATGGGAGGCTTCATGCGGTGACGCACAGGGTGATGATGGGTGGAAATAAAGAGAGGTATTCGTTCGCGCAGTTTGCACTGCCAAAGGAAGAAGATGAGATTGAGGTGCCTGCTGAGCTGGTTGATTCTGATCATCCTCTTCTTTATCGACCTTTTAATTATGGAAAATACTTCGATTATTATACTTCATCTCTCAACGACAACGCCCTCGAAGTATTCGCAGGTGTCTGA 951 0.5016 MMTTTIPCLVLSEVEEGSKEWSAMSRKVREACETHGCFVLLHNRTSLVRLQEEMLSAMKALFDLPEETKMKHTSPKPYRSYHANCPIIPLLQSFGVDDAPQPLTAQAFTRLMWPHGNPAFCETMKSMSEEMLELNFVLMKMIVEGLGLPKHYISDVEKMKSTSNFRMIKYRAPFSSSSSSSVQDLETGLVPHTDKCAITTLCQNDVQGLQVLTKQGHWIDVNVPRHGLVVFVGDILKGWSNGRLHAVTHRVMMGGNKERYSFAQFALPKEEDEIEVPAELVDSDHPLLYRPFNYGKYFDYYTSSLNDNALEVFAGV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g1489 316 Gene3D - 4 313 IPR027443 -
Lele27g1489 316 Pfam 2OG-Fe(II) oxygenase superfamily 182 265 IPR044861 -
Lele27g1489 316 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 268 IPR005123 -
Lele27g1489 316 FunFam 2-oxoglutarate-dependent dioxygenase DAO 4 315 - -
Lele27g1489 316 SUPERFAMILY Clavaminate synthase-like 4 305 - -
Lele27g1489 316 Pfam non-haem dioxygenase in morphine synthesis N-terminal 6 83 IPR026992 -
Lele27g1489 316 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 20 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g1489 Lele-ChrLele27 20930884 20932236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele27g1489 6 301 Glycosyltransferase AT5G59530 27.419 2.22e-17 80.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0627 04 3793053 3796331 Lele27g1489 27 20930884 20932236 CCT
Lele25g0593 25 3769066 3769539 Lele27g1489 27 20930884 20932236 hybridization
Lele26g0607 26 3873807 3875187 Lele27g1489 27 20930884 20932236 hybridization