Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0607 ATGATGATACCGTGTATGGTTTTCTCGGAGGTGGAAGAAGGGAGTGAGGAATGGAGAGCTATGAGCAGGAAAGTGACGGAGGCGTGTGAGACTCATGGCTGCTTCGTGCTTCTGCATAGCAGAACCAGTTTGATTAGTTTACAGGAAGAAATGTTGACCGCCATGAAAGCTCTCTTTGATCTTCCTGAAGAGACCAAGATGAAGCACACTAGCCCTAAGCCTTACCGGAGCTACCATGCCAACTGCCCCATCATTCCTCTCCTTCAAAGCTTCGGCGTGGACGACGCTCCTCAGCCTCTCACTGCTCAAGCTTTCACTCACCTCATGTGGCCTCACGGCAACCCCACTTTCTGCGAGGCGATGAAGTCGATGAGCGAGGAGATGCTGGAGCTGAACTTCGTGCTGATGAAGATGATAGTGGAGGGTCTGGGCCTTCCGAAACACTACATCTCAGACGTGGAGAAGATGAAGAGCACAAGTAATTTCAGGATGATAAAGTACAGAGCACCTTCTTCTTCCTCAAGCGTCCAAGACCTAGAGACTGGTCTCGTTCCTCACACCGACAAATGCGCCATAACCACCCTCTGTCAGAACGATGTCCAGGGACTCCAGGTCCTCACCAAACAAGGCCATTGGATCGATGTGAACGTTCCCCGGAATGGCCTAGTCGTCGTCGTCGGCGATATCCTCAAGGCTTGGAGCAATGGGAGGCTTCATGCGGTGACACACAGAGTGATGATGGGTGGCAGCAAGGAGAGGTATTCGTTCGCGCAATTTGCACTGCCAAAGGAAGACGATGAGATCGAGGTGCCCGCTGAGTTGGTTGATTCTGATCATCCTCTTCTTTATCGACCTTTCAATTATGGAAAATACTTCGACTATTATACTTCATCTCTCAACGAAAACGCCCTCCAAGTATTCGCAGGTGTCTGA 933 0.5059 MMIPCMVFSEVEEGSEEWRAMSRKVTEACETHGCFVLLHSRTSLISLQEEMLTAMKALFDLPEETKMKHTSPKPYRSYHANCPIIPLLQSFGVDDAPQPLTAQAFTHLMWPHGNPTFCEAMKSMSEEMLELNFVLMKMIVEGLGLPKHYISDVEKMKSTSNFRMIKYRAPSSSSSVQDLETGLVPHTDKCAITTLCQNDVQGLQVLTKQGHWIDVNVPRNGLVVVVGDILKAWSNGRLHAVTHRVMMGGSKERYSFAQFALPKEDDEIEVPAELVDSDHPLLYRPFNYGKYFDYYTSSLNENALQVFAGV 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0607 310 Pfam 2OG-Fe(II) oxygenase superfamily 170 259 IPR044861 -
Lele26g0607 310 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 80 IPR026992 -
Lele26g0607 310 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 157 262 IPR005123 -
Lele26g0607 310 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 17 291 - -
Lele26g0607 310 SUPERFAMILY Clavaminate synthase-like 12 298 - -
Lele26g0607 310 FunFam 2-oxoglutarate-dependent dioxygenase DAO 1 308 - -
Lele26g0607 310 Gene3D - 2 308 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0607 Lele-ChrLele26 3873807 3875187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0607 1 295 Glycosyltransferase AT5G59530 28.065 5.57e-19 84.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0627 04 3793053 3796331 Lele26g0607 26 3873807 3875187 CCT
Lele26g0607 26 3873807 3875187 Lele27g1489 27 20930884 20932236 hybridization
Lele26g0607 26 3873807 3875187 Lele28g0594 28 3797109 3798499 hybridization