Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g0593 ATGATGACGACGATGATACCGTGTCTGGTTTTCTCGGAGGTTGAAGAAGGGAGTGAGGAATGGAGCGCTATGAGCAGGAAAGTGAGAGAGGCGTGCGAGACTCATGGCTGCTTCGTGCTTCTGCACAACAGAACCAGTTTGGTTAGGTTACAGGAAGAAATGTTGAGCGCCATGAAAGCTCTCTTTGATCTTCCTGAAGAGACCAAGATGAAGCACACTAGCCCGAAGCCTTACCGGAGCTACCATGCCAACTGCCCCGTCATTCCTCTTCTTCAGAGCTTCGGCGTCGACGACGCTCCTCAACCTCTCACTGCTCACGCTTTCACTCGCCTCATGTGGCCTCACGGCAACCCCACTTTCTGGTATATCTTCTTCTTCTTCTTCTTTCATGTTCTCTTCAGTGTATTCAAATCTGAGTTTGAACTGGGAGAGATACACCAGACTCGCTCACCACCAACGTATCTGCCATATTAA 474 0.4979 MMTTMIPCLVFSEVEEGSEEWSAMSRKVREACETHGCFVLLHNRTSLVRLQEEMLSAMKALFDLPEETKMKHTSPKPYRSYHANCPVIPLLQSFGVDDAPQPLTAHAFTRLMWPHGNPTFWYIFFFFFFHVLFSVFKSEFELGEIHQTRSPPTYLPY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g0593 157 Pfam non-haem dioxygenase in morphine synthesis N-terminal 6 83 IPR026992 -
Lele25g0593 157 Gene3D - 2 131 IPR027443 -
Lele25g0593 157 SUPERFAMILY Clavaminate synthase-like 10 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g0593 Lele-ChrLele25 3769066 3769539 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0627 04 3793053 3796331 Lele25g0593 25 3769066 3769539 CCT
Lele25g0593 25 3769066 3769539 Lele27g1489 27 20930884 20932236 hybridization
Lele25g0593 25 3769066 3769539 Lele28g0594 28 3797109 3798499 hybridization