Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele27g0846 ATGTGGGATCCAGAATGTTCGAGACAGTGTTCTATAGCCAGAGAATATAATGAAGAGAAACTGAAAAGTTGTGGTGAATTTGACCTGGTGAGAAACAAAAAGCAACCAATGGCTGATTACATTGTCCCAAAGAAGAACAGTAACCATAAACCAATGGCTCAATCAGAAGCCCCTCACGGCTGCTCTAATATTGTGTGGGTAATCTTCATTCTGTGGATACCAATGACTCTACCACTAATCGCCTGGATATGCATTTTTGTACACTCGTTTACACCTCCAAACTATAAGTCCTTCACTCCACTTTACCCTTCTCTCCCAGCTCGCCATTCCCAACAACAACAAGAACAACCCCTTCGCCTTCTTCTCTCATCAGAAGAAACAACCAGCACAGCCATGGCTGCCTCCCTCTCCACTGTCGGAGCAGTCAACAGAACTCCCCTGAGCATTAATGGTTCTGGAGCTGGAGCTTCGGTTCCGAGCTCAGCTTTCATGGGGACAAGCTTGAAGAAGGTTTTTGGTTCAAGGCTTGCCAACTACAAATCTGGGAACTTTAAGGTTGTTGCTGCAGAGAAAGAGATTGATGAGGAGCAGCAGACAGACAAAGACAAATGGAAGGGTTTGGCTTTTGACACGTCTGATGACCAGCAAGATATTACCAGAGGGAAGGGAATGGTTGACTCTCTCTTCCAAGCTCCCATGCAAACTGGAACTCACTATGCTGTCATGAGCTCTTACGAGTACCTCAGCACCGGTCTTCGCCAGTACAACCTTGACAACAACATGGACGGCTTTTACATTGCTCCTGCTTTCATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCATGACCCTTCCTAACATCAAGATTCCTCTTATCCTTGGTATCTGGGGAGGCAAAGGTCAAGGAAAATCCTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCCGGAGAGTTGGAGAGTGGGAATGCCGGAGAGCCAGCAAAATTGATCAGGCAAAGGTACCGTGAAGCAGCAGACATAATCAAGAAGGGAAAGATGTGCTGTCTGTTCATCAACGATCTCGACGCCGGAGCTGGTCGTATGGGAGGAACCACCCAATACACAGTGAACAACCAGATGGTGAACGCCACCCTCATGAACATCGCCGACAACCCCACCAACGTCCAACTCCCAGGTATGTACAACAAGGAAGAGAACCCCCGGGTCCCCATCATCGTCACCGGTAACGACTTCTCCACCCTCTACGCCCCCCTCATCCGTGACGGTCGTATGGAGAAATTCTACTGGGCCCCCACCAGAGAAGACCGTATCGGTGTCTGCAAGGGTATCTTCCGTACCGACGGCGTCGCTGACCAGGACATCGTCAAGATCGTCGACACCTTCCCCGGCCAATCCATTGATTTCTTCGGAGCATTGAGGGCGAGAGTGTACGACGACGAAGTGAGGAAGTGGATTTCAGGGATTGGAGTGGAAGGTGTAGGGAAGAAGCTGGTGAACTCAAGGGAAGGACCACCGACATTTGAGCAGCCAAAGATGACAGTGGAAAAGCTGTTGGAGTACGGAAACATGTTGGTGCAAGAACAAGAGAATGTGAAGAGAGTCCAATTGGCTGACAAGTATCTGAGCGAAGCTGCTCTTGGTGATGCCAACCAAGATGCCATTAAGAGTGGAACTTTCTACGGAGCTAGTTGA 1719 0.4887 MWDPECSRQCSIAREYNEEKLKSCGEFDLVRNKKQPMADYIVPKKNSNHKPMAQSEAPHGCSNIVWVIFILWIPMTLPLIAWICIFVHSFTPPNYKSFTPLYPSLPARHSQQQQEQPLRLLLSSEETTSTAMAASLSTVGAVNRTPLSINGSGAGASVPSSAFMGTSLKKVFGSRLANYKSGNFKVVAAEKEIDEEQQTDKDKWKGLAFDTSDDQQDITRGKGMVDSLFQAPMQTGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVADQDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWISGIGVEGVGKKLVNSREGPPTFEQPKMTVEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANQDAIKSGTFYGAS 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele27g0846 572 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 441 553 - -
Lele27g0846 572 Gene3D - 256 440 IPR027417 -
Lele27g0846 572 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 256 440 - -
Lele27g0846 572 Gene3D - 441 553 - -
Lele27g0846 572 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 269 471 IPR027417 -
Lele27g0846 572 PANTHER - 145 558 IPR044960 -
Lele27g0846 572 Pfam ATPase family associated with various cellular activities (AAA) 296 437 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele27g0846 Lele-ChrLele27 16503302 16507644 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0846 27 16503302 16507644 Lele28g1242 28 8208343 8211744 ECH
Lele25g1233 25 8218680 8221273 Lele27g0846 27 16503302 16507644 ECH
Lele26g1250 26 8179102 8182440 Lele27g0846 27 16503302 16507644 ECH
Lele27g0846 27 16503302 16507644 Lele25g1233 25 8218680 8221273 ECH
Lele27g0846 27 16503302 16507644 Lele26g1250 26 8179102 8182440 ECH
Lele27g0846 27 16503302 16507644 Lele27g0846 27 16503302 16507644 ECH
Lele28g1242 28 8208343 8211744 Lele27g0846 27 16503302 16507644 ECH
Lele25g1233 25 8218680 8221273 Lele27g0846 27 16503302 16507644 hybridization
Lele26g1250 26 8179102 8182440 Lele27g0846 27 16503302 16507644 hybridization