Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g1250 ATGATTCTATCACTAATCCCCTGGATATGCATTTTTGTACACTCGTTTACCCCTCCCATCTATAAGTCCTTCACACCTCTTCACTCTTCTCTCCCAGCTCCCCATTCTCTCCCCAACAACAACAACAACAACAGCAACAATCTCTCTCCCTTCTCTCACCAGAAGAAACAACCAGTTACAGCCATGGCTGCCTCCCTCTCCACCGTCGGAGCAGTCAACAGAACTCCCCTGAGCATTAATGGGTCTGGAGCTGGAGCTTCGGTTCCGAGCTCAGCTTTCATGGGGACGAGCTTGAAGAAGGTATTTGGTTCAAGGCTTCCCAACTACAAAGCTGGGAACTTTAAGGTTGTTGCGGCAGAGAAAGAGATTGATGAGGAGCAGCAGACAGACAAAGACAAATGGAAGGGTCTGGCTTATGACATTTCTGATGACCAGCAAGACATTACCAGAGGGAAGGGAATGGTTGACTCTCTCTTCCAAGCTCCCATGCAAAGTGGAACTCACTATGCTGTCATGAGCTCTTACGAATACCTCAGCACCGGTCTTCGCCAGTACAACCTTGACAACAACATGGACGGCTTTTACATTGCTCCTGCCTTCATGGACAAGCTTGTTGTTCACATCACCAAGAACTTCATGACCCTTCCTAACATCAAGATTCCTCTCATCCTTGGTATCTGGGGAGGCAAAGGTCAAGGAAAATCCTTCCAATGTGAGCTTGTCTTTGCCAAGATGGGAATCAACCCCATCATGATGAGTGCCGGAGAGTTAGAAAGTGGGAACGCCGGAGAGCCAGCAAAATTGATCAGGCAAAGGTACCGTGAAGCAGCAGACATCATCAAGAAGGGAAAGATGTGCTGTCTGTTCATCAACGATCTCGACGCCGGAGCTGGTCGTATGGGAGGAACCACCCAATACACAGTGAACAACCAGATGGTGAACGCCACCCTCATGAACATCGCCGACAACCCCACCAACGTCCAACTCCCAGGTATGTACAACAAGGACGAGAACCCCCGTGTCCCCATCATCGTCACCGGTAACGACTTCTCCACCCTCTACGCCCCCCTTATCCGTGACGGTCGTATGGAGAAATTCTACTGGGCCCCCACCAGAGAAGACCGTATAGGTGTCTGCAAGGGTATCTTCCGTACCGACGGCGTCGCCGACTCGGACATCGTCAAGATCGTCGACACCTTCCCAGGCCAATCCATTGATTTCTTCGGAGCATTGAGGGCGAGAGTGTACGACGACGAGGTGAGGAAGTGGGTTTCAGGGATTGGAGTGGAAGGAGTAGGGAAGAAGCTGGTGAACTCAAAGGAAGGACCACCGACATTTGAGCAGCCGAAGATGACAGTGGACAAGCTGTTGGAGTACGGAAACATGTTGGTGCAAGAACAGGAGAATGTGAAGAGAGTCCAATTGGCTGATAAGTACCTGAGCGAGGCTGCTCTTGGTGACGCCAACCAAGATGCCATTAAGAGTGGATCTTTCTACGGCCAAGCAGCACAGCAAGTAAACTTACCTGTTCCAGAAGGATGCACTGATCCAAATGCCAAAAACTTTGACCCAACTGCAAGGAGTGATGATGGAAGCTGCGTATATAAACTTTAA 1614 0.5006 MILSLIPWICIFVHSFTPPIYKSFTPLHSSLPAPHSLPNNNNNNSNNLSPFSHQKKQPVTAMAASLSTVGAVNRTPLSINGSGAGASVPSSAFMGTSLKKVFGSRLPNYKAGNFKVVAAEKEIDEEQQTDKDKWKGLAYDISDDQQDITRGKGMVDSLFQAPMQSGTHYAVMSSYEYLSTGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKDENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVADSDIVKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGIGVEGVGKKLVNSKEGPPTFEQPKMTVDKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANQDAIKSGSFYGQAAQQVNLPVPEGCTDPNAKNFDPTARSDDGSCVYKL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g1250 537 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 186 370 - -
Lele26g1250 537 FunFam Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic 371 483 - -
Lele26g1250 537 Gene3D - 371 483 - -
Lele26g1250 537 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 396 IPR027417 -
Lele26g1250 537 PANTHER - 77 535 IPR044960 -
Lele26g1250 537 Pfam ATPase family associated with various cellular activities (AAA) 226 367 IPR003959 GO:0005524|GO:0016887
Lele26g1250 537 Gene3D - 186 370 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g1250 Lele-ChrLele26 8179102 8182440 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1233 25 8218680 8221273 Lele26g1250 26 8179102 8182440 ECH
Lele26g1250 26 8179102 8182440 Lele25g1233 25 8218680 8221273 ECH
Lele26g1250 26 8179102 8182440 Lele26g1250 26 8179102 8182440 ECH
Lele26g1250 26 8179102 8182440 Lele27g0846 27 16503302 16507644 ECH
Lele26g1250 26 8179102 8182440 Lele28g1242 28 8208343 8211744 ECH
Lele27g0846 27 16503302 16507644 Lele26g1250 26 8179102 8182440 ECH
Lele28g1242 28 8208343 8211744 Lele26g1250 26 8179102 8182440 ECH
Lele26g1250 26 8179102 8182440 Lele27g0846 27 16503302 16507644 hybridization
Lele26g1250 26 8179102 8182440 Lele28g1242 28 8208343 8211744 hybridization