Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0232 ATGATTAACGCAGTTCTTACTAAACTTCAAAATTATTCGAGCACGGATCACTACGAAGCTTTTTCATTTGTTTTTTATCTTCTCTTTTGCTCCGTCCTCATAAGCAACCTTATCGTCATCGTCCCTCCCTCGGGATCTCCCATCTCTGCAACCATGGACAGAGAACAGGAAGAGATGCAATTTCTGGGCCTCTTCGGAGTCTTCACAGAATCCATCAAAATCTTATCATCATGGCGGAAGATCTTCACCCAGATCACCCTTACTCTCATTCTCCCTCTCTCCTTCATCTACCTCCTCCACATAGAAGTCACCAACATCCTTTTACGCAAAATCTTCTACAACGCCCAAGAAATGAACGACACTCCTCTGGGCTCACCCCGCTACGAGAAGCTCTCCGATCTCCTCTCCTCCGAATGGGCCACTTTCTGGCTCTTCAAGATCTTCTACTTCACTCTCCTCCTCGTCTTGTCTCTCCTCTCCACCTCCGCCGTCGTCTACTCCATCGCCTCCATCTACACCGCAAGAGACGTCACTTTCCGTAAAGTCATGAGCGTCGTCCCCAGGGTCTGGAAACGCCTCATGGTTACTTTCCTGTGCCTCTTCGCTGCCTTTATTGCTTATCACATCATCGTCTTCTTACTTGTATTCATATGGGCACTTACCATCGGAATCAGAAATGGAGGGATCGCCGTCCTTGTGATCCTGGTCATATTGTTCTTCGCAGGGTTTGTGTATTTGACTATAATCTGGCAAATAGCCAGCGTTGTGTCGGTGTTGGAGGAGTCGTATGGGATTCAAGCCATGATGAAGAGCAAGGAATTGATAAAGGGGAAGATGGGACTGGCCACAGTGATATTCTTAATGCTCAACGTTACGTTTATCCTAATTCAGGTTTTGTTCAAGGAGGTGGTGGTGCACGGATGGAGGCTGGGCTCCGTCGACAGAACAGCTTATGCGATACTGTGTTTCTTGTTGCTGTCGGTGTTTTTCCTGTTTGGGCTGGTGATCCAAACGGTGCTCTATTTTGTCTGCAAGTCCTATCACCATGAGAATATCGACAAGTCGGCTTTATCGGATCACCTGGAAGCCTATTTAGGAGAGTATGTGCCCTTGACGGCCAAAGATGTTCAGCTAGAGCAATACCACGACCTTTTGCAATTTTGCCAAAAGCTTGTATCAAGAATCAGCACAACTCGAAAACAATACATCCCAACATTATCTGGCCGAAGCACTGGAAAGGCGAGGTCAGGCTTGTGGCACTCCCCCTCTCATTCTTCATATTCTTCTCTTCTCTTTCCTTCTCTTCCATCTCTTCCTTCCAGTTTTGAATTTCAATCCACCATGGTTAAGGATACTGAGTATTATGATATCCTTGGGGTTAGTCCCTCTGCTTCCGAGGTCGAAATTCGAAAGGCTTACTACCACAAGGCAATGCGAGTTCATCCCGATAAGAACCCAAACGATCCTCAGGCTGCTCAAAAATTTCAGGTTCTGGGCGAGGCTTATCAAATTTTAAGCGATCCAGTGCAGAGGAACGCATACAATCAAAATGGAAAGCATTCCGTGTCTAGGGAAGCTATGGTTGATCCAATGGCTGTCTTTGCCCTGCTTTTTGGAAGTGAATTATTTGAGGACTACGTTGGGCATCTAACTGCGGCATCAATGACTTCTTCTGAAATGGCAGATGAAAGTGAATATCCAGATAAAATACATGAAAAGTTGAAGGCAAGTATGTTTAACAATTCAGTCTCTGCTGTCCAGAGAGAAAGGGAAGAAAAACTAGCAAGTTTTTTAAAAGACTTTCTGGATCAATATGTCCGTGGTGATGAAAAGGGGTTCTTGCAGCGAGCAGAATCTGAGGCCAAACGACTTTCTAATGCAGATTTTGGACTTGATATTTTACAAACCATCGGCTATATTTATTCAAGACAGGCAGCACTGGAATTAGGGAAAAAGGCCATTTATCTTGGAGTGCCTTTTTTGGCTGAATGGGTTCGAAATAAAGGACATTTCTGGAAATCACAATTTACTGCTGCTAAAGGGGCATTTCAGTTGCTGCAGCTTCAAGAAGACATGCACAAGCAATTTAAAATGGATGGTAGTGGCCCTGAAAATGATATTGAATCTCATATTCGCCTTAATAAGGATACACTTATGAATTCTCTATGGAAGTTGAATGTCGTAGACATAGAAGTGACCCTGGTACATGTCTGCCAAATGGTCTTAAGGGAAAATAACGTTAAGAAAGAAGAGCTCAGAGCCCGTGCTAACGCTCTCAAGATTCTTGGGAAGTTATTTCAGGAAAAGAATTCAAAAGGAGAAGGAGCATCGAAGAAGAAAATTGCGGCAGATTCTGAGGATGAAGGAAGCAGTTCAGATTCTTCGGAGGATGATGAATTACCGAGAGCAGTTTCCTATCGAACGCCCTTTTTCACTCAGGGTCACGTATTCATTCTGTCAGCTGTTGTGTTTGTGCAGGGTATAGGAAGGCTGTTCAAATGCCTGTGTAATCCAGCATTTGATGTGGACGACGAAGAGATAGTTTACAGAAGCAAATGA 2559 0.4435 MINAVLTKLQNYSSTDHYEAFSFVFYLLFCSVLISNLIVIVPPSGSPISATMDREQEEMQFLGLFGVFTESIKILSSWRKIFTQITLTLILPLSFIYLLHIEVTNILLRKIFYNAQEMNDTPLGSPRYEKLSDLLSSEWATFWLFKIFYFTLLLVLSLLSTSAVVYSIASIYTARDVTFRKVMSVVPRVWKRLMVTFLCLFAAFIAYHIIVFLLVFIWALTIGIRNGGIAVLVILVILFFAGFVYLTIIWQIASVVSVLEESYGIQAMMKSKELIKGKMGLATVIFLMLNVTFILIQVLFKEVVVHGWRLGSVDRTAYAILCFLLLSVFFLFGLVIQTVLYFVCKSYHHENIDKSALSDHLEAYLGEYVPLTAKDVQLEQYHDLLQFCQKLVSRISTTRKQYIPTLSGRSTGKARSGLWHSPSHSSYSSLLFPSLPSLPSSFEFQSTMVKDTEYYDILGVSPSASEVEIRKAYYHKAMRVHPDKNPNDPQAAQKFQVLGEAYQILSDPVQRNAYNQNGKHSVSREAMVDPMAVFALLFGSELFEDYVGHLTAASMTSSEMADESEYPDKIHEKLKASMFNNSVSAVQREREEKLASFLKDFLDQYVRGDEKGFLQRAESEAKRLSNADFGLDILQTIGYIYSRQAALELGKKAIYLGVPFLAEWVRNKGHFWKSQFTAAKGAFQLLQLQEDMHKQFKMDGSGPENDIESHIRLNKDTLMNSLWKLNVVDIEVTLVHVCQMVLRENNVKKEELRARANALKILGKLFQEKNSKGEGASKKKIAADSEDEGSSSDSSEDDELPRAVSYRTPFFTQGHVFILSAVVFVQGIGRLFKCLCNPAFDVDDEEIVYRSK 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0232 852 Gene3D DnaJ domain 440 533 IPR036869 -
Lele26g0232 852 ProSiteProfiles dnaJ domain profile. 453 518 IPR001623 -
Lele26g0232 852 ProSitePatterns Nt-dnaJ domain signature. 495 514 IPR018253 -
Lele26g0232 852 PRINTS DnaJ domain signature 473 488 IPR001623 -
Lele26g0232 852 PRINTS DnaJ domain signature 455 473 IPR001623 -
Lele26g0232 852 PRINTS DnaJ domain signature 490 510 IPR001623 -
Lele26g0232 852 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 369 790 - -
Lele26g0232 852 MobiDBLite consensus disorder prediction 776 799 - -
Lele26g0232 852 SMART dnaj_3 452 510 IPR001623 -
Lele26g0232 852 CDD DnaJ 453 507 IPR001623 -
Lele26g0232 852 Pfam X-domain of DnaJ-containing 587 780 IPR026894 -
Lele26g0232 852 SUPERFAMILY Chaperone J-domain 447 548 IPR036869 -
Lele26g0232 852 Pfam DnaJ domain 453 515 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0232 Lele-ChrLele26 1339398 1349001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0232 454 528 Miscellaneous Gene Families AT1G16680 39.744 8.14e-09 57.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0260 01 1479284 1483570 Lele26g0232 26 1339398 1349001 CCT
Lele02g0249 02 1411265 1414463 Lele26g0232 26 1339398 1349001 CCT
Lele03g0266 03 1457959 1462754 Lele26g0232 26 1339398 1349001 CCT
Lele04g0257 04 1521700 1524922 Lele26g0232 26 1339398 1349001 CCT
Lele26g0232 26 1339398 1349001 Lele27g1867 27 23436106 23437104 hybridization