Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele25g1217 ATGAATGGCGCCGGAGATGAACCAGGAGTTGACGCGGCGGCATTGCGAGGACTCAAGGTCTACATGTGGGGTTACCTTCCTGGAGCTCTGCCGCAGAGATCGCCGCTCTTGACTCCGGTGCCTGTTAGGGCTCCTGCTTCGATTGGTTCTGCCGGTTACTCCTGGAAGGATGTTTGCGGTGGTGGTTGTGGATTTGCCATGGCTATCTCTGAGTCAGGAAAGCTCATCACTTGGGGATCAACTGATGATCTAGGTCAAAGCTATGTGACATCTGGCAAGCACGGGGAAATTCCTGAGCCTTTCCCTATTCCAACTGAAGCTTCTATCGTAAGGGCTGCAGCTGGATGGGCACATTGTGCTGCTGTTATTGATGGTGGTGAAGTTTACACATGGGGATGGAAGGAATGTGTTCCGTCTGGGAAAGTATTTGGTGAATCATCAACTGGGGCAAGTCCTGAAAAGGATTTATCGGAAAGGCAGAGTTCATTATTGACAGAGCAAGTGAGCCCTCGCTCCCAAGTCTCAAGATCATCTGGAGGAACTGCTTCCAGTGCTAGTGGAGATGAAGGTACAAAGCGAAGGAGAGTTTCTTCAGCAAAGCAAACAGCTGAAAGCTCAACATCTGGTGATGATACTCTGACAGCTTTTCCATGTCTTGTTGCACTAAATCCGGGTATAAGAATAACAACTGTTGCTGCTGGTGGACGTCATACCTTATCATTGTCAGATATAGGACAGGTGTGGGGTTGGGGCTATGGAGGAGAAGGGCAGCTTGGCTTAGGCTCCAGAATACGAATGGTCTCCTCTCCTCATCTTATTCCTTGCATTAATTCTTCTGCATATGGAAAAGATAGATTTGCTGCACTTGCTCAAGGGAGCATGAATCCTGGGGGACAGAATTTTAGAGCTCCTGGGAGTTATGTGAAGGGAATTGCTTGCGGAGGTCGGCACAGTGCAGTTATCACAGATGCTGGCGCTTTGCTTACTTTTGGTTGGGGACTATATGGACAGTGTGGGCAAGGAAGTACAGATGATGAGCTAAGCCCAGCATGCGTATCTTCCTTGTTGGGTATCCGAATAGAGGGAGTCGCTGCAGGACTGTGGCATACGGTCTGTGTATCTGCTGATGGTGATGTATATGCCTTTGGAGGAAATCAATTTGGCCAGTTGGGGACTGGTGATGATCAAGCTGAGACTATACCGAGGCTACTGGATTCTCCAAGCTTGGAAAATGATCATGTAAAGATTGTATCCTCTGGAGCTCGCCATACTGCGGTGGTAACAGAGAAAGGGAAAGTATTTTGTTGGGGATGGAACAAGTACGGACAGCTTGGCGTTGGGGATGTGATTGACCGTAACATTCCTTCTCAAGTCACCATTGAAGGATGTGTGCCTAAAAACGTTGCATGTGGCTGGTGGCATACTCTTCTTCTGGCTGAGTCACCCACTTGA 1452 0.4876 MNGAGDEPGVDAAALRGLKVYMWGYLPGALPQRSPLLTPVPVRAPASIGSAGYSWKDVCGGGCGFAMAISESGKLITWGSTDDLGQSYVTSGKHGEIPEPFPIPTEASIVRAAAGWAHCAAVIDGGEVYTWGWKECVPSGKVFGESSTGASPEKDLSERQSSLLTEQVSPRSQVSRSSGGTASSASGDEGTKRRRVSSAKQTAESSTSGDDTLTAFPCLVALNPGIRITTVAAGGRHTLSLSDIGQVWGWGYGGEGQLGLGSRIRMVSSPHLIPCINSSAYGKDRFAALAQGSMNPGGQNFRAPGSYVKGIACGGRHSAVITDAGALLTFGWGLYGQCGQGSTDDELSPACVSSLLGIRIEGVAAGLWHTVCVSADGDVYAFGGNQFGQLGTGDDQAETIPRLLDSPSLENDHVKIVSSGARHTAVVTEKGKVFCWGWNKYGQLGVGDVIDRNIPSQVTIEGCVPKNVACGWWHTLLLAESPT 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele25g1217 483 MobiDBLite consensus disorder prediction 144 187 - -
Lele25g1217 483 MobiDBLite consensus disorder prediction 143 210 - -
Lele25g1217 483 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 311 321 IPR000408 -
Lele25g1217 483 SUPERFAMILY RCC1/BLIP-II 17 481 IPR009091 -
Lele25g1217 483 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 377 430 IPR000408 -
Lele25g1217 483 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 231 241 IPR000408 -
Lele25g1217 483 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 88 479 - -
Lele25g1217 483 Gene3D - 173 408 IPR009091 -
Lele25g1217 483 Gene3D - 12 152 IPR009091 -
Lele25g1217 483 Gene3D - 409 483 IPR009091 -
Lele25g1217 483 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 325 376 IPR000408 -
Lele25g1217 483 Pfam Regulator of chromosome condensation (RCC1) repeat 430 478 IPR000408 -
Lele25g1217 483 Pfam Regulator of chromosome condensation (RCC1) repeat 376 427 IPR000408 -
Lele25g1217 483 Pfam Regulator of chromosome condensation (RCC1) repeat 325 373 IPR000408 -
Lele25g1217 483 PRINTS Chromosome condensation regulator RCC1 signature 426 447 IPR000408 -
Lele25g1217 483 PRINTS Chromosome condensation regulator RCC1 signature 109 122 IPR000408 -
Lele25g1217 483 PRINTS Chromosome condensation regulator RCC1 signature 366 384 IPR000408 -
Lele25g1217 483 PRINTS Chromosome condensation regulator RCC1 signature 231 247 IPR000408 -
Lele25g1217 483 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 363 373 IPR000408 -
Lele25g1217 483 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 431 481 IPR000408 -
Lele25g1217 483 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 417 427 IPR000408 -
Lele25g1217 483 Pfam Regulator of chromosome condensation (RCC1) repeat 228 257 - -
Lele25g1217 483 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 73 125 IPR000408 -
Lele25g1217 483 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 245 324 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele25g1217 Lele-ChrLele25 8071315 8076502 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1233 26 8064244 8068223 Lele25g1217 25 8071315 8076502 CCT
Lele27g0860 27 16622540 16626824 Lele25g1217 25 8071315 8076502 CCT
Lele28g1228 28 8077536 8081519 Lele25g1217 25 8071315 8076502 CCT
Lele25g1217 25 8071315 8076502 Lele25g1217 25 8071315 8076502 CCT
Lele25g1217 25 8071315 8076502 Lele26g1232 26 8049652 8054923 CCT
Lele25g1217 25 8071315 8076502 Lele27g0861 27 16637284 16642340 CCT
Lele25g1217 25 8071315 8076502 Lele28g1226 28 8063446 8067489 CCT
Lele25g1217 25 8071315 8076502 Lele25g1217 25 8071315 8076502 ECH
Lele25g1217 25 8071315 8076502 Lele26g1232 26 8049652 8054923 ECH
Lele25g1217 25 8071315 8076502 Lele27g0861 27 16637284 16642340 hybridization
Lele25g1217 25 8071315 8076502 Lele28g1226 28 8063446 8067489 hybridization