Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1796 ATGTCTAAGGCTTCGTTTGTTTGCTGCATTCTCCTGGGCCTTCTGCTCTTCTCTCATTCTCATGCAGAGGAACCCGAGATTGGAACCTTTGTCCTCAAGAGAGGACAATTCCAAGTCAAGTTGACTAACTTTGGAGCCACTATCATGTCTTTTATCGTACCTGATAAAAATGGAAACTTAGATGATATCGTCCTCGGCTATGATTCTGTTAAGGATTACAAGAACGATACAACATATTTTGGTGCTCTTGTTGGACGTGTGGCCAATAGAATTGGAGGAGCTACATTCTCTTTGGATGGAAAAACCTACCATTTGCCTGCTAATGATGGAAATAACACACTCCACGGTGGACCCAAGGGTTACAGTCAAGTTGTATGGAATGTAGAGTCCCACAAAGAAGATAGTCACATCACATTTACTCATGTCAGTCCCGACAACGATCAAGGCTTTCCGGGAAAGCTTGAGGTTTCTGTGACTTACGCTTTCTACCAATCAAACAAGTTCATTGTGTGGATGGAAGCCAAGCCAGTTGACAAAGCCACACCAGTGAATCTTGCTCAACATACTTACTGGAATCTGAGGGGCCACAACAGTGGAGACATTCTATCACATAAGATTCATATATTTGGTTCAAGAATCACACCAGTGAACGACCAACTCATCCCAACAGGTAAGTTCGAGGAAATTAAGGGAACCCCATATGACTTCCTTGAACCAAAAGAAATTGGAAGTCAGATTCATGATCTTCCTGATGGCTATGACATAAACTATGTTTTGGACAAGAATAAGTCAAAGCACTTTAATAGAGTGGCTGTGGTCAAGGACTCAGTTTCTGGGAGGAAGATGGAACTATGGTCAAATAAACCTGGTGTGCAGTTCTATTCAAGCAACATGGTGAAGAATGAGAAAGGTAAAGATGGAGCTATATATCAGAAGTATGCTGCTATTGCATTGGAGACACAGGGATTTCCAGATTCAGTGAACCAACCACATTTCCCATCACAGATTGTTAAACCGGGAGAGACTTATAAGCACTTCATGGTTTATAGATTCACTGCTGAGTAG 1065 0.4197 MSKASFVCCILLGLLLFSHSHAEEPEIGTFVLKRGQFQVKLTNFGATIMSFIVPDKNGNLDDIVLGYDSVKDYKNDTTYFGALVGRVANRIGGATFSLDGKTYHLPANDGNNTLHGGPKGYSQVVWNVESHKEDSHITFTHVSPDNDQGFPGKLEVSVTYAFYQSNKFIVWMEAKPVDKATPVNLAQHTYWNLRGHNSGDILSHKIHIFGSRITPVNDQLIPTGKFEEIKGTPYDFLEPKEIGSQIHDLPDGYDINYVLDKNKSKHFNRVAVVKDSVSGRKMELWSNKPGVQFYSSNMVKNEKGKDGAIYQKYAAIALETQGFPDSVNQPHFPSQIVKPGETYKHFMVYRFTAE 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1796 354 PANTHER ALDOSE-1-EPIMERASE 26 352 - -
Lele24g1796 354 SUPERFAMILY Galactose mutarotase-like 23 351 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele24g1796 354 Gene3D - 17 353 IPR014718 GO:0030246
Lele24g1796 354 CDD galactose_mutarotase_like 37 351 - -
Lele24g1796 354 PIRSF GALM 17 354 IPR015443 GO:0016853|GO:0019318
Lele24g1796 354 Pfam Aldose 1-epimerase 30 350 IPR008183 GO:0005975|GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1796 Lele-ChrLele24 23057180 23058645 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele24g1796 11 353 Miscellaneous Gene Families AT3G47800 59.184 4.02e-153 433
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0139 23 889901 891543 Lele24g1796 24 23057180 23058645 ECH
Lele24g1796 24 23057180 23058645 Lele24g1796 24 23057180 23058645 ECH
Lele21g1876 21 26138575 26139948 Lele24g1796 24 23057180 23058645 hybridization
Lele22g1844 22 23426857 23431963 Lele24g1796 24 23057180 23058645 hybridization