Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1876 ATGTCTAAGGCATCGTTTGTTTGCTGCATTTTCTTGGGCCTTTTGCTCTTCTCTCAGGCTCATGCAGAGGAACCCAAGATTGGAACCTATGATTACAAGAACAATACAGCATATTTTGGTGCACTTGTTGGACGTGTGGCCTACCATTTGCCTGCTAATGATGGAAATAACACACTCCACGGTGGACCCAAGGGTTACAGTCAGGTTGTGTGGATTGTAGAATCCCACAAAGAAGATAGTCATATCACATTCACTCATCTTGAGGTTTCTGTGACTTACGCTTTTTTCCAAACAAACAAGTTCATTGTGTGGATGGAAGCCAAGCCGGTTGACAAAGGCACACCAGTGAATCTTGCTCAACATACTTACTTGAATCTGAGGGGCCACAACAGTGGAGACATTCTCTCACATAAGATTCAGATATTTGGTTCAAGAATCACACCGAATAAGTCAAAGCACTTTAATAGAGTGGCTGTGGTCAAGGACTCAGTTTCTGGGAGGAAGATGGAGCTATGGTCAAATAAACCTGGTGTGCAGTTCTATTCAAGCAACATGGTGAAGAATGAGAAAGATTCTGTGAACCAACCAGATTTCCCATCACAGATTGTCAAACCAGGAGAGACATATAAGCACTTCATGGTTTACAGATTTACTGCTGAGTAG 663 0.4268 MSKASFVCCIFLGLLLFSQAHAEEPKIGTYDYKNNTAYFGALVGRVAYHLPANDGNNTLHGGPKGYSQVVWIVESHKEDSHITFTHLEVSVTYAFFQTNKFIVWMEAKPVDKGTPVNLAQHTYLNLRGHNSGDILSHKIQIFGSRITPNKSKHFNRVAVVKDSVSGRKMELWSNKPGVQFYSSNMVKNEKDSVNQPDFPSQIVKPGETYKHFMVYRFTAE 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1876 220 SUPERFAMILY Galactose mutarotase-like 31 217 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele21g1876 220 Gene3D - 151 219 IPR014718 GO:0030246
Lele21g1876 220 Pfam Aldose 1-epimerase 154 216 IPR008183 GO:0005975|GO:0016853
Lele21g1876 220 Pfam Aldose 1-epimerase 31 151 IPR008183 GO:0005975|GO:0016853
Lele21g1876 220 Gene3D - 28 150 IPR014718 GO:0030246
Lele21g1876 220 PANTHER ALDOSE-1-EPIMERASE 153 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1876 Lele-ChrLele21 26138575 26139948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele21g1876 15 219 Miscellaneous Gene Families AT3G47800 40.264 4.19e-61 193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1876 21 26138575 26139948 Lele22g1844 22 23426857 23431963 ECH
Lele21g1876 21 26138575 26139948 Lele21g1876 21 26138575 26139948 ECH
Lele21g1876 21 26138575 26139948 Lele23g0139 23 889901 891543 hybridization
Lele21g1876 21 26138575 26139948 Lele24g1796 24 23057180 23058645 hybridization