Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1844 ATGTCTAAAGCATCGTTGGCTTTCTGCATTCTTCTGGGCATTGTGTTTGTTTATGGAGTTGATGCAGAAGATGGGAAATTGGCCGATGTTGTCCTTGGCTTTGGTTCAGTTGAGTCGTACAAGAATTGGAGGGGAGCTCACTTCACTTTAAATGGCAAAACCTACCATTTGCCTGCAAATGATGGAAACAACACTCTTCACGGTATAGCAGACAGTTATATCACTTTTACCTATGTCAGTTCTGACAATGAACAAGGTTTTCCTGGAAAACTTGAGATTACTGTGACATACATGTTGTTTCAAACCAACAAGTTGAAAGTGAAGATGCAAGCAAAGCCCATTGACAAAGCGACACCGGTGAACCTAGCTCAGCACAGTTACTGGAACTTGAGAGGCCATAACAGTGGAGACATTCTCTCACACACCATTCAACTATTCGGCTCACAAATCACACCTGTCAACGACCAACTCATTCCCACCAGTGAGATGAAGCCAGTGAAGGGAACCCCATATGACTTCCTTCAGCCTATAGAAATTTCAAGTCAGATTCATAAACTCCCCAATGGCTATGACATAAAGTACGTGGTGGATTACAAGAATGGTTCCAAGCACTTTCATAGGGTGGCTATGGTGAAGGACTCAGTTTCTGGGAGGAAGATGGAGCTATGGTCAAACCAAGCTGGTGTGCAATTCTATAGAATTCTTCAGAGCTTGCTTTCTCCATCTTCTACAATGTCTAAGGCTTCGTTTGTTTGCTGCATTCTCCTGGGACTTCTGTTCTTCTCTCAGGCTCATGCAGAGGAACCCGAGATTGGAACCTATGTCCTCAAGAGAGGACAATTCCAAGTCAAGTTGACTAACTTTGGCGCCACTATTGTGTCTTTTATAGTACCTGATAAAAATGGAAACTTGGATGATATCGTCCTCGGCTATGATTCTGTTAAGGATTACAAGAACGATACAACATATTTTGGTGCACTTGTTGGACGTGTGGCCAATAGAATTGGAGGAGCTACATTCTCTTTGGATGGAAAAACCTACCATTTGCCTGCTAATGATGGAAATAACACACTCCACGGTGGACCCAAGGGTTACAGTCAAGTTGTATGGAATGTAGAATCTCACAAAGAAGATAGTCACATCACATTTACTCATGTCAGTCCCGACAACGATCAAGGCTTTCCGGGAAAGCTTGAGGTTTCTGTGACTTACGCTTTCTACCAATCAAACAAGTTCATTGTGTGGATGGAAGCCAAGCCAGTTGACAAAGCCACACCAGTGAATCTTGCTCAACATACTTACTGGAATCTGAGGGGCCACAACAGTGGAGACATTCTCTCACATAAGATTCAGATATTTGGTTCAAGAATCACACCAGTGAACGACCAACTCATCCCAACAGGTAAGTTCGAGGAAATTAAGGGAACCCCATATGACTTCCTTGAACCAAAAGAAATTGGAAGTCAGATTCATGATCTTCCTGATGGCTATGACATAAACTATGTTTTGGACAAGAATAAGTCAAAGCACTTTAATAGAGTGGCTGTGGTCAAGGACTCAGTTTCTGGCAGGAAGATGGAACTATGGTCAAATAAACCTGGTGTGCAGTTCTATTCAAGCAACATGGTGAAGAATGAGAAAGGTAAAGATGGAGCTATATATCAGAAGTATGCTGCTATTGCATTGGAGACACAGGGATTTCCAGATTCAGTGAACCAACCACATTTCCCATCACAGATTGTTAAACCAGGAGAGACTTATAAGCACTTCATGGTTTATAGATTCACTGCTGAGTAG 1797 0.4246 MSKASLAFCILLGIVFVYGVDAEDGKLADVVLGFGSVESYKNWRGAHFTLNGKTYHLPANDGNNTLHGIADSYITFTYVSSDNEQGFPGKLEITVTYMLFQTNKLKVKMQAKPIDKATPVNLAQHSYWNLRGHNSGDILSHTIQLFGSQITPVNDQLIPTSEMKPVKGTPYDFLQPIEISSQIHKLPNGYDIKYVVDYKNGSKHFHRVAMVKDSVSGRKMELWSNQAGVQFYRILQSLLSPSSTMSKASFVCCILLGLLFFSQAHAEEPEIGTYVLKRGQFQVKLTNFGATIVSFIVPDKNGNLDDIVLGYDSVKDYKNDTTYFGALVGRVANRIGGATFSLDGKTYHLPANDGNNTLHGGPKGYSQVVWNVESHKEDSHITFTHVSPDNDQGFPGKLEVSVTYAFYQSNKFIVWMEAKPVDKATPVNLAQHTYWNLRGHNSGDILSHKIQIFGSRITPVNDQLIPTGKFEEIKGTPYDFLEPKEIGSQIHDLPDGYDINYVLDKNKSKHFNRVAVVKDSVSGRKMELWSNKPGVQFYSSNMVKNEKGKDGAIYQKYAAIALETQGFPDSVNQPHFPSQIVKPGETYKHFMVYRFTAE 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1844 598 SUPERFAMILY Galactose mutarotase-like 25 233 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele22g1844 598 CDD galactose_mutarotase_like 274 595 - -
Lele22g1844 598 Gene3D - 260 597 IPR014718 GO:0030246
Lele22g1844 598 PANTHER ALDOSE-1-EPIMERASE 266 596 - -
Lele22g1844 598 Gene3D - 13 252 IPR014718 GO:0030246
Lele22g1844 598 SUPERFAMILY Galactose mutarotase-like 266 595 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele22g1844 598 Pfam Aldose 1-epimerase 26 233 IPR008183 GO:0005975|GO:0016853
Lele22g1844 598 Pfam Aldose 1-epimerase 274 594 IPR008183 GO:0005975|GO:0016853
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1844 Lele-ChrLele22 23426857 23431963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1844 255 597 Miscellaneous Gene Families AT3G47800 59.475 1.17e-150 436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1876 21 26138575 26139948 Lele22g1844 22 23426857 23431963 ECH
Lele22g1844 22 23426857 23431963 Lele22g1844 22 23426857 23431963 ECH
Lele22g1844 22 23426857 23431963 Lele23g0139 23 889901 891543 hybridization
Lele22g1844 22 23426857 23431963 Lele24g1796 24 23057180 23058645 hybridization