Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0139 ATGTCTAAACCATCGTTGGCTTTCTGCATTGTTCTGGGCATTGTTTTTGTTTTTGGAGTTGATGCAGAAGATGTTAATAAGGTAGGAATTTATGAGCTGAGGAGAGGACAGTTCCAGATCAAGTTAACGAACTATGGTGCTACCATTATGTCTTTAATGGTCCCTGATAGACATGGGAAATTGGCCGATATTGTCCTTGGCTTTGATTCAGTTGACTCGTACAAGAATGATACAGTATACTTTGGGGCCCTGATTGGACGTGTGGCTAATAGAATTGGAGGAGCTCGCTTTACTTTAAATGGAAAAACCTACCATTTGCCTGCAAACGATGGAAACAACACTCTTCACGGCGGTCCCAAAGGTTTCAGCGAAGTTGTATGGAACGTAGCTTCCCACAAAGTAGACAGTCATATCACATTTACCTATCTCAGTTCTGACAATGAACAAGGGTTTCCGGGCAAACTTGAGGTTGCTGTGACATACATGTTGTTTCAAACCAACAAGTTGATAGTGAAGATGGAAGCAAAGGCCACAGACAAAGCGACACCAGTGAATCTAGCTCAGCACAGTTACTGGAACTTGAGGGGCCATAACAGTGGAGACATTCTCTCACACACCATTCAATTATTCGGCTCACAAATCACACCTGTCAACGACCAACTCATCCCCACAGGCGAGATCAATCCTGTGAAAGGAACCCCATATGACTTCCTTCAACCTAAACGAATTTCAACTCAGATTCATAAACTGCCCAATGGATATGACATAAACTACGTGGTTGATCACAAGAATGATTATTCCAAGCACTTTCATAGAGTGGCTGTGGTGAAGGACTCAGTTTCTGGGAGGAAGATGGAGCTATGGTCAAACCAAGCTGGTGTGCAGTTCTATACGAGTAACATGTTGAAGGATGTGAAAGGCAAAGGTGGATTAACCTATGAGAAGTTTGCAGGTCTTTGCTTGGAAACACAGGGGTTTCCAGATTCAGTGAATCATCCAAATTTTCCATCACAGATTGTGAATCCTGGAGAGATATATAAGCACTTCATGCTTTACAGATTCACTGCTGAGTAG 1074 0.4274 MSKPSLAFCIVLGIVFVFGVDAEDVNKVGIYELRRGQFQIKLTNYGATIMSLMVPDRHGKLADIVLGFDSVDSYKNDTVYFGALIGRVANRIGGARFTLNGKTYHLPANDGNNTLHGGPKGFSEVVWNVASHKVDSHITFTYLSSDNEQGFPGKLEVAVTYMLFQTNKLIVKMEAKATDKATPVNLAQHSYWNLRGHNSGDILSHTIQLFGSQITPVNDQLIPTGEINPVKGTPYDFLQPKRISTQIHKLPNGYDINYVVDHKNDYSKHFHRVAVVKDSVSGRKMELWSNQAGVQFYTSNMLKDVKGKGGLTYEKFAGLCLETQGFPDSVNHPNFPSQIVNPGEIYKHFMLYRFTAE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0139 357 FunFam Aldose 1-epimerase 19 356 - -
Lele23g0139 357 SUPERFAMILY Galactose mutarotase-like 25 354 IPR011013 GO:0003824|GO:0005975|GO:0030246
Lele23g0139 357 CDD galactose_mutarotase_like 31 354 - -
Lele23g0139 357 Gene3D - 17 356 IPR014718 GO:0030246
Lele23g0139 357 Pfam Aldose 1-epimerase 31 353 IPR008183 GO:0005975|GO:0016853
Lele23g0139 357 PIRSF GALM 19 357 IPR015443 GO:0016853|GO:0019318
Lele23g0139 357 PANTHER ALDOSE-1-EPIMERASE 27 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0139 Lele-ChrLele23 889901 891543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele23g0139 14 356 Miscellaneous Gene Families AT3G47800 63.265 2.85e-163 459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0139 23 889901 891543 Lele24g1796 24 23057180 23058645 ECH
Lele23g0139 23 889901 891543 Lele23g0139 23 889901 891543 ECH
Lele21g1876 21 26138575 26139948 Lele23g0139 23 889901 891543 hybridization
Lele22g1844 22 23426857 23431963 Lele23g0139 23 889901 891543 hybridization