Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele24g1723 ATGGCTAGCCAGGCAGAAGATCAAGGTCGAGGGGCTAGTAGGATAAAGGACTCGGAGGCAGAGGAGGAGGAGAAGCGCTCGCAGAAGCCCGTGGTCTCCTCCGAGGAGGGTGCTAGTCAAGGGGAGAATAATATGGCACCCTCATCAGGCAATTCAATTCACCGCTCGAGTTCAAGGCCTCAGCTCGATGTCAGTAAAGCTGAAATCCAAGCGAATGTTGAAGAGAAGTATCCCACTATTTTGTTACCCAACCAATCTGATGATATATCTCACCTTGCTCTTGACCTTGGAGGTAAAATTAAGTTTCGTAGTGCCAATGTACAAGACAATTGTGATCTGTTGCTCTTTCTTTCCAATCCTGAGAAGTTCTCTGCTCTTCTGTTTGTTACGAAGAATGGGATTGAGTCATTGTTTTTATGGAGTTCTTTGGGATCAAGATCTCTGATAAAGTTGGTGTATTTTTCAAGACACGAGGATCAATCAGTCAATGATAAAAGGAAGAAAAATATGAAGGAGCGACTGGGAATTTCTAATGTCAACAGGAGAAGCTATCCTATTCTCGGTGGGAGACTTCATTTTGTGAAGTTCGAGACAAGCAAGGTTAACGAGTGCTTAGACTTCATTTATTCAAAGCAGCTTCACTGCGGTGGTGGTGGAGCCTACAAGTTCGCTGACCTTTTCAAAGAAAGGCTTGGGGTTAGTATCGAAAAAGAAGATGAAATGGCTTGTCTCGTGTCAGGAGCAAATTTCCTGCTTAAGGCAATTCGTCATGAAGCTTTCACCCATATGGAGGGCCAAAAAGAATTCGTTCAAATTGACCCTAATGATCTGTTTCCTTATCTTCTAGTTAATATCGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGGAAATTCGAGAGGGTTAGTGGTACAAATGTTGGTGGTGGTACGTATTGGGGCTTGGGAAGGCTTTTGACGAAGTGCAAGAGTTTTGATGAGTTGCTGGAGCTGAGTCAAAAAGGAGATAATAGGACCATTGATATGCTTGTTGGGGATATTTATGGTGGTATGGACTACTCTAAGATTGGCCTATCGGCTTCAACCATAGCTTCAAGTTTTGGCAAGACTATATCAGAAAAAAAGGAGCTTGAAGACTATAGACCCGAAGATATCTCACTGTCTCTTTTACGAATGATGTCATACAATATTGGCCAGATATCTTACTTGAATGCACTGCGATTTGGGCTGAAGCGTATCTTTTTTGGAGGATTTTTTATACGGGGTCATGCATATACCATGGACACTATTTCCTTTGCAGTTCAGTTCTGGTCTAAAGGGACAGCACAAGCAATGTTCTTGCGACATGAAGGATTCCTAGGAGCATTAGGGGCGTTTATGAGCTATGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGATTCCCAATGGGTGCCCCATATACTGGAGGCAAGATTCATGGCCCTCCACTTGGTGATTTGAATGAGAAGGCAACTCATTCCCTCATGAAAGCTACTGTATATGGGCTCAGCCATCCAAAAGTGCATTATGAAGAAAATGGGCTGTTATACCCCTTTCCAAGGCGCCCCATCCTGCAAGCAAAAGGGCCTAACCCCTTATTTCCTGCCTACTGCAATGGGCGCATTGATTCAATCAGCTTTTGTGTTCTTTTGTCAATTTTAGTGGCTCCAATACAGATTTCATGGATGGAGAAGTTTTTGCAAAAGGGAACTGAGATAACTGCACCTGTGCCAATGATTCAACCTGGAACTACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCGAAAGGAAGTACTCTGCGATCTGATGCCATTGCTCTAAATGTTGGTGTACTCCACCTACTACCGACATTGGAGGTGTTTCCATTATTAGCAGACCCTAAAATGTATGAGCCTAATACTATTGATCTCTCTGACCACGGAGAATTTGAATATTGGTTCAATATTCTGTTAGAGCACTTGCCCGATCTTGTGGACAAGGTTGGAGGTCTCTTTTTTCGTGCTTCTCAGGCTGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTTGTGCATTTTCTGCTCACTTGGCAAGGTTGATGGAGGAACCTGCTGCATATGGGAAGGAAAATGAAGCTTCACTTGCTGTTTTACCTGACTTATTGATGGAGCTTGACATTATGGATGAGGAAACAAGACTACTTGCGCTAGTTGAAGGTGTTCTTGCTGCAAACATTTTTGATTGGGGATCTCGAGCATGTGTGGATCTTTATCATCAAGGAACAATTATTGAAATTTATAGAATGAGCCGCAATAAAATGCATAGACCTTGGCGGGTGGATAATTTCGATGGCTTCAAAGAGAGAATGATAGGGACTGGGGACAGAAAGCCTACCCCACACAGAAGAGCTTTGCTGTTTGTGGATAATTCAGGTGCTGATGTTGTCCTAGGGATGCTTCCCTTGGCACGGGAGCTCCTTCGGCGTGGAACTGAAGTGGTTCTGGTAGCAAATTCCCTTCCTGCAATAAATGATGCAACTGCAGTAGAACTTCCTGACATTGTAGCTGAGGCTGCCAAGCATTGTGACATTCTTAGGCGAGCCGCTGAAGCCGGAGGCTTAATTGTGGATGCAATGATTAGCAATTCAAACAGCTCAAAAGAAAGTTCAACTTCAGTTCCCTTGATGGTTGTTGAGAATGGATGCGGAAGTCCTTGTATAGACTTAAGACAGGTCAGCTCTGAGTTGGCCGCCGCCGCCAAGGATGCTGATTTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCATACCAACCTCAATGTCAGATTTAAGTGTGATGCCTTGAAGTATCTTCAGATGGAACTTAGTTAG 2904 0.4377 MASQAEDQGRGASRIKDSEAEEEEKRSQKPVVSSEEGASQGENNMAPSSGNSIHRSSSRPQLDVSKAEIQANVEEKYPTILLPNQSDDISHLALDLGGKIKFRSANVQDNCDLLLFLSNPEKFSALLFVTKNGIESLFLWSSLGSRSLIKLVYFSRHEDQSVNDKRKKNMKERLGISNVNRRSYPILGGRLHFVKFETSKVNECLDFIYSKQLHCGGGGAYKFADLFKERLGVSIEKEDEMACLVSGANFLLKAIRHEAFTHMEGQKEFVQIDPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISEKKELEDYRPEDISLSLLRMMSYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGTAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKATHSLMKATVYGLSHPKVHYEENGLLYPFPRRPILQAKGPNPLFPAYCNGRIDSISFCVLLSILVAPIQISWMEKFLQKGTEITAPVPMIQPGTTGLGGFEVPLSKGSTLRSDAIALNVGVLHLLPTLEVFPLLADPKMYEPNTIDLSDHGEFEYWFNILLEHLPDLVDKVGGLFFRASQAVASEGGTDDAKRRGDAFACAFSAHLARLMEEPAAYGKENEASLAVLPDLLMELDIMDEETRLLALVEGVLAANIFDWGSRACVDLYHQGTIIEIYRMSRNKMHRPWRVDNFDGFKERMIGTGDRKPTPHRRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVANSLPAINDATAVELPDIVAEAAKHCDILRRAAEAGGLIVDAMISNSNSSKESSTSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLNVRFKCDALKYLQMELS 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele24g1723 967 MobiDBLite consensus disorder prediction 32 63 - -
Lele24g1723 967 Gene3D - 144 274 - -
Lele24g1723 967 FunFam Pantothenate kinase 2 141 271 - -
Lele24g1723 967 SUPERFAMILY Actin-like ATPase domain 230 463 IPR043129 -
Lele24g1723 967 SUPERFAMILY Actin-like ATPase domain 147 258 IPR043129 -
Lele24g1723 967 Pfam Fumble 147 461 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lele24g1723 967 Gene3D - 340 452 - -
Lele24g1723 967 SUPERFAMILY AF1104-like 623 960 IPR036075 -
Lele24g1723 967 MobiDBLite consensus disorder prediction 10 31 - -
Lele24g1723 967 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 791 965 - -
Lele24g1723 967 FunFam Pantothenate kinase 2 258 443 - -
Lele24g1723 967 Pfam Damage-control phosphatase ARMT1-like domain 720 957 IPR002791 -
Lele24g1723 967 PANTHER PANTOTHENATE KINASE 62 881 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lele24g1723 967 TIGRFAM panK_eukar: pantothenate kinase 147 462 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lele24g1723 967 MobiDBLite consensus disorder prediction 1 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele24g1723 Lele-ChrLele24 22506237 22518532 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0222 23 1512998 1525644 Lele24g1723 24 22506237 22518532 ECH
Lele24g1723 24 22506237 22518532 Lele24g1723 24 22506237 22518532 ECH
Lele21g1786 21 25521658 25533237 Lele24g1723 24 22506237 22518532 hybridization
Lele22g1762 22 22861161 22872137 Lele24g1723 24 22506237 22518532 hybridization