Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1762 ATGGCTGGCCAGACAGAAGATCAAGGTCGAGGGGCTAGTAGGATAAAGGACCCGGAGGCAGAGGAGGAGGAGAAGCGCTCGCAGAAGCCCGTGGTCTCCTCCGAGGAGGGTGCTAGTCAAGGGGAGAATAATATGGCACCCTCATCAGGCAATTCAATTCACCGCTCGAGTTCAAGGCCTCAGCTCGATGTCAGTAAAGCTGAAATCCAAGCGAATGTTGAAGAGAAATATCCCACTATTTTGTTACCCAACCAATCTGATGATATATCTCACCTTGCGCTTGACCTTGGAGGATCTCTGATAAAGTTGGTGTATTTTTCAAGACACGAGAATCAATCAGTCAATGATAAAAGGAAGAAAAATATGAAGGAGCGACTGGGAATTTCTAATGTCAACAGGAGAAGCTATCCTATTCTCGGTGGGAGACTTCATTTTGTGAAGTTCGAGACAAGCAAGGTTAACGAGTGCTTAGACTTCATTTATTCAAAGCAGCTTCACTGCGGTGGGTTGGAATCACGTTACTCTGATAATGTGGCTGACCAGAATGGCATAATTAAGGCTACAGGTGGTGGAGCCTACAAGTTCGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTATCGAAAAAGAAGATGAAATGGCCTGTCTCGTGTCAGGAGCAAATTTCCTGCTTAAGGCAATACGTCATGAAGCTTTCACCCATATGGAGGGCCAAAAAGAATTCGTACAAATTGACCCTAATGATCTGTTTCCTTATCTTCTAGTTAATATCGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGGAAATTCGAGAGGGTTAGTGGGACAAATGTTGGTGGAGGTACGTATTGGGGCTTGGGAAGGCTTTTGACGAAGTGCAAGAGTTTTGATGAGTTGCTGGAGCTGAGTCAAAAAGGAGATAATAGGACCATTGATATGCTTGTTGGGGATATTTATGGTGGTATGGACTACTCTAAGATTGGCCTATCGGCTTCAACCATAGCTTCAAGTTTTGGCAAGACTATATCAGAAAAAAAGGAGCTTGAAGACTATAGACCCGAAGATATCTCACTGTCTCTTTTACGAATGATTTCATACAATATTGGCCAGATATCTTATTTGAATGCACTGCGATTTGGGCTGAGGCGTATCTTTTTTGGAGGATTTTTTATACGGGGTCATGCATATACCATGGACACTATTTCTTTTGCAGTTCAGTTCTGGTCTAAAGGGACAGCACAAGCAATGTTCTTGCGACATGAAGGATTCCTAGGAGCATTAGGTGCGTTTATGAGCTATGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGATTCCCAATGGGTGCCCCATATACTGGAGGCAAGATTCATGGCCCTCCACTTGGTAATTTGAATGAGAAGATTTCGTGGATGGAGAAGTTTTTGCAAAAGGGAACTGAGATAACTGCACCTGTGCCAATGATTCAACCTGGAACTACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTACTCTGCGATCTGATGCCAGTGCTCTAAATGTTGGTGTACTCCACCTAGTACCGACATTGGAGGTGTTTCCATTATTAGCAGACCCTAAAACGTATGAGCCTAATACTATTGATCTCTCAGACCTCGGTGAATTTGAATATTGGTTCAGTATTCTGTTAGAGCACTTGCCCGATCTTGTGGACAAGGCTGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCTTGCATTTTCTACTCACTTGGCAAGATTGATGGAGGAACCTGCTGCATATGGGAAGTTAAGCTTGGCCAATCTATTGGAAATGAGAGAAGAGTGCTTGAGAGAATTCCAGTTTTTTGATGCCTATAGAAGTATAAAGCAGAGGGAAAATGAAGCTTCACTTGCTGTTTTACCTGACTTATTGATGGAGCTTGACAGTATGGATGAGGAAACTAGACTACTTGCGCTAGTTGAAGGTGTTCTTGCTGCAAACATTTTTGATTGGGGATCTCGAGCATGTGTGGATCTCTATCATCAAGGAACAATTATTGAAATTTATAGAATGAGCCGCAATAAAATGCATAGACCTTGGCGGGTGGATAATTTTGATGACTTCAAAGAGAGAATGATAGGGACTGGGGACAGAAAACCTACCCCACACAGAAGAGCTTTGTTGTTTGTGGATAATTCAGGTGCTGATGTTGTTCTAGGGATGCTTCCCTTGGCACGGGAGCTCCTTCGGCGTGGAACTGAAGTGGTTCTGGTGGCAAATTCCCTTCCTGCAATAAATGATGCCACTGCAGTAGAACTTCCTGACATTGTAGCTGAGGCTGCCAAGCATTGTGACATTCTTAGGCGAGCCGCTGAAGCCGGAGGCTTAATTGTCAGCTCTGAGTTGGCCGCCGCAGCTAAGGACGCTGATTTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCATACCAACCTCAATGCCAGATTTAAGTGTGATGCCTTGAAGCTTGCAATGGTGAAAAACCAGAGGTTGGCTGAAAAGTTGATTAACGGCAAATTATACGACTGCATTTGCAAATATGAGCCTGCTAGTTGA 2628 0.438 MAGQTEDQGRGASRIKDPEAEEEEKRSQKPVVSSEEGASQGENNMAPSSGNSIHRSSSRPQLDVSKAEIQANVEEKYPTILLPNQSDDISHLALDLGGSLIKLVYFSRHENQSVNDKRKKNMKERLGISNVNRRSYPILGGRLHFVKFETSKVNECLDFIYSKQLHCGGLESRYSDNVADQNGIIKATGGGAYKFADLFKERLGVSIEKEDEMACLVSGANFLLKAIRHEAFTHMEGQKEFVQIDPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISEKKELEDYRPEDISLSLLRMISYNIGQISYLNALRFGLRRIFFGGFFIRGHAYTMDTISFAVQFWSKGTAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGNLNEKISWMEKFLQKGTEITAPVPMIQPGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKTYEPNTIDLSDLGEFEYWFSILLEHLPDLVDKAVASEGGTDDAKRRGDAFALAFSTHLARLMEEPAAYGKLSLANLLEMREECLREFQFFDAYRSIKQRENEASLAVLPDLLMELDSMDEETRLLALVEGVLAANIFDWGSRACVDLYHQGTIIEIYRMSRNKMHRPWRVDNFDDFKERMIGTGDRKPTPHRRALLFVDNSGADVVLGMLPLARELLRRGTEVVLVANSLPAINDATAVELPDIVAEAAKHCDILRRAAEAGGLIVSSELAAAAKDADLIILEGMGRALHTNLNARFKCDALKLAMVKNQRLAEKLINGKLYDCICKYEPAS 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1762 875 MobiDBLite consensus disorder prediction 32 63 - -
Lele22g1762 875 FunFam Pantothenate kinase 1 91 229 - -
Lele22g1762 875 Gene3D - 83 243 - -
Lele22g1762 875 Pfam Fumble 91 433 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lele22g1762 875 SUPERFAMILY Actin-like ATPase domain 202 435 IPR043129 -
Lele22g1762 875 FunFam Pantothenate kinase 2 83 243 - -
Lele22g1762 875 MobiDBLite consensus disorder prediction 10 31 - -
Lele22g1762 875 PANTHER PANTOTHENATE KINASE 61 803 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lele22g1762 875 FunFam Pantothenate kinase 2 547 633 - -
Lele22g1762 875 PIRSF PanK_long 45 875 IPR015844 GO:0004594|GO:0015937
Lele22g1762 875 Gene3D - 552 632 IPR035073 -
Lele22g1762 875 SUPERFAMILY Actin-like ATPase domain 89 230 IPR043129 -
Lele22g1762 875 TIGRFAM panK_eukar: pantothenate kinase 91 434 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lele22g1762 875 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 712 873 - -
Lele22g1762 875 Gene3D - 312 424 - -
Lele22g1762 875 MobiDBLite consensus disorder prediction 1 63 - -
Lele22g1762 875 Pfam Damage-control phosphatase ARMT1-like domain 618 859 IPR002791 -
Lele22g1762 875 FunFam Pantothenate kinase 2 230 415 - -
Lele22g1762 875 SUPERFAMILY AF1104-like 526 873 IPR036075 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1762 Lele-ChrLele22 22861161 22872137 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1786 21 25521658 25533237 Lele22g1762 22 22861161 22872137 ECH
Lele22g1762 22 22861161 22872137 Lele22g1762 22 22861161 22872137 ECH
Lele22g1762 22 22861161 22872137 Lele23g0222 23 1512998 1525644 hybridization
Lele22g1762 22 22861161 22872137 Lele24g1723 24 22506237 22518532 hybridization