Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele23g0222 ATGGCTGGTCTGGCTGAAGATCAAGGTCGAGGGGCTAGTAGGATAAAGGACCCAGAGGCCGAGGAGGAGGAGAAGCGCTCGCAGAAGCCCGTGGTCTCCTCCGAGGAGGGTGCTAGTCAAGGGGAGAATAATATGGCACCCACATCAGGCAGCTCAATTCACCGCTCGAGTTCAAGGCCTCAGCTCGATGTCAGTAAAGCTGAAATCCAAGCGAATGTTGAGGAGAAGTATCCCACTATTCTGTTACCCAACCAATCTGATGATATATCTCACCTTGCTCTTGATCTTGGAGGATCTTTGATAAAGTTGGTGTATTTTTCAAGACACGAAAATCAATCAGTCAATGATAAAAGGAAGAAGAATACGAAGGAGGGACTGGGAATTTCTAATGTCAACAGGAGAAGCTATCCTATTCTCGGCGGGAGACTTCATTTTGTGAAGTTCGAGACAAGCAAGGTTAACGAGTGCTTAGACTTCATTTATTCAAAGCAGCTTCACTGTGGTGGGTTGGAATCACGTTACTCTGATAATGTGGCCGACCAGAATGGCATAATTAAGGCTACAGGAGGTGGAGCATACAAGTTTGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTATCGAAAAAGAGGACGAAATGGCTTGTCTTGTGTCAGGAGCAAATTTCCTGCTTAAGGCAATTCGTCATGAAGCTTTCACCCATATGGAGGGCCAAAAAGAATTTGTTCAAATTGACCCTAATGATCTGTTTCCTTATCTTCTAGTTAATATCGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGGAAATTTGAGAGGGTTAGTGGTACAAATGTTGGTGGTGGTACATATTGGGGCTTGGGAAGGCTTTTGACGAAGTGCAAGAGTTTTGATGAGTTGCTGGAGCTGAGTCAAAAAGGCGATAATAGGACCATTGATATGCTTGTTGGGGATATTTATGGTGGTATGGACTACTCTAAGATTGGCCTATCTGCTTCAACTATAGCTTCAAGTTTTGGCAAGACTATATCAGAAAAAAAGGAGCTTGAAGACTATAGACCTGAAGATATCTCGCTGTCTCTTTTACGAATGATTTCATACAATATTGGCCAGATATCTTACTTGAATGCACTGCGATTTGGGCTGAAGCGTATCTTTTTTGGAGGATTTTTTATACGGGGTCATGCATATACCATGGACACTATTTCTTTTGCAGTTCAGTTCTGGTCTAAGGGGACAGCACAAGCAATGTTCTTGCGACATGAAGGATTCCTAGGAGCATTAGGTGCGTTTATAAGCTACGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGATTCCCAATGGGTGCACCATATACTGGAGGCAAGATTCATGGCCCTCCACTTGGTGATTTGAACGAGAAGATTTCATGGATGGAGAAGTTCTTGCAAAAGGGAACTGAGATAACTGCACCTGTGCCAATGATTCAACCTGGAACTACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTACTCTGCGATGTGATGCCAGTGCTCTAAATGTTGGTGTACTCCACCTAGTACCGACATTGGAGGTGTTTCCATTATTAGCAGACCCTAAAACGTATGAGCCTAATACTATTGATCTCTCAGATCACAGTGAATTTGAATATTGGTTCAATATTCTGTTAGAGCACTTGCCCGATCTTGTAGACAAGGCTGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCTCACTTGGCAAGATTGATGGAGGAACCTGCTGCATATGGGAAGTTAAGCTTAGCCAATCTATTGGAAATGAGAGAAGAGTGCTTGAGAGAATTCCAGTTTGTTGATGCCTATAGAAGTATAAAGCAGAGGGAAAATGAAGCTTCACTTGCTGTTTTACCTGACTTGTTGATGGAGCTTGACAGTATGGATGAGGAAACAAGACTACTTGCGCTAATTGAGGGTGTTCTCGCTGCAAACATTTTTGATTGGGGATCTCGAGCATGCGTGGATCTTTATCATCAAGGAACAATTATTGAAATTTATAGAATGAGCCGCAATAAAATGCAGAGACCTTGGCGGGTGGATAATTTTGATGACTTCAAAGAGAGAATGTTAGGGACTGGGAACAGAAAACCTACCCCACACAAAAGAGCTTTGCTGTTTGTGGATAATTCAGGCGCTGATGTTGTTCTAGGGATGATTCCCCTGGCCCGGGAGCTCCTTCGGCGTGGAACTGAAGTGGTTCTGGTGGCAAATTCCCTTCCTGCAATAAATGATGCAACTGCAGCAGAACTTCCTGACATTGTAGCTGAGGCTGCCAAGCATTGTGACATTCTTAGGCGAGCCGCCGAAGCCGGAGGCTTAATCGTGGATGCAATGATTAACCCTTCAAACAGCTCAAAAGAAAGTTCAACTTCAGTTCCCTTGATGGTTGTTGAGAATGGGTGCGGGAGTCCTTGTATAGACTTAAGACAGGTCAGCTCTGAGTTGGCTGCTGCTGCTAAGGATGCTGATTTGATAATTTTGGAAGGGATGGGTAGATCTCTTCATACCAACCTCAATGCCAGATTTAAGTGCGATGCCTTGAAGCTTGCAATGGTGAAAAACCAGAGGTTGGCTGAAAAGTTGATTAATGGCAAATTATACGACTGCATTTGCAAATATGAGCCTGCCAATTGA 2736 0.4371 MAGLAEDQGRGASRIKDPEAEEEEKRSQKPVVSSEEGASQGENNMAPTSGSSIHRSSSRPQLDVSKAEIQANVEEKYPTILLPNQSDDISHLALDLGGSLIKLVYFSRHENQSVNDKRKKNTKEGLGISNVNRRSYPILGGRLHFVKFETSKVNECLDFIYSKQLHCGGLESRYSDNVADQNGIIKATGGGAYKFADLFKERLGVSIEKEDEMACLVSGANFLLKAIRHEAFTHMEGQKEFVQIDPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISEKKELEDYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGTAQAMFLRHEGFLGALGAFISYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMIQPGTTGLGGFEVPLSKGSTLRCDASALNVGVLHLVPTLEVFPLLADPKTYEPNTIDLSDHSEFEYWFNILLEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLSLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLMELDSMDEETRLLALIEGVLAANIFDWGSRACVDLYHQGTIIEIYRMSRNKMQRPWRVDNFDDFKERMLGTGNRKPTPHKRALLFVDNSGADVVLGMIPLARELLRRGTEVVLVANSLPAINDATAAELPDIVAEAAKHCDILRRAAEAGGLIVDAMINPSNSSKESSTSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRSLHTNLNARFKCDALKLAMVKNQRLAEKLINGKLYDCICKYEPAN 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele23g0222 911 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 712 909 - -
Lele23g0222 911 FunFam Pantothenate kinase 2 230 415 - -
Lele23g0222 911 Pfam Damage-control phosphatase ARMT1-like domain 616 895 IPR002791 -
Lele23g0222 911 MobiDBLite consensus disorder prediction 1 64 - -
Lele23g0222 911 SUPERFAMILY Actin-like ATPase domain 89 230 IPR043129 -
Lele23g0222 911 FunFam Pantothenate kinase 2 83 243 - -
Lele23g0222 911 SUPERFAMILY Actin-like ATPase domain 202 435 IPR043129 -
Lele23g0222 911 Pfam Fumble 91 433 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lele23g0222 911 PANTHER PANTOTHENATE KINASE 61 803 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lele23g0222 911 MobiDBLite consensus disorder prediction 10 31 - -
Lele23g0222 911 FunFam Pantothenate kinase 1 91 229 - -
Lele23g0222 911 TIGRFAM panK_eukar: pantothenate kinase 91 433 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lele23g0222 911 PIRSF PanK_long 44 911 IPR015844 GO:0004594|GO:0015937
Lele23g0222 911 SUPERFAMILY AF1104-like 526 909 IPR036075 -
Lele23g0222 911 Gene3D - 312 424 - -
Lele23g0222 911 Gene3D - 548 633 IPR035073 -
Lele23g0222 911 MobiDBLite consensus disorder prediction 32 64 - -
Lele23g0222 911 FunFam Pantothenate kinase 2 547 633 - -
Lele23g0222 911 Gene3D - 83 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele23g0222 Lele-ChrLele23 1512998 1525644 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele23g0222 23 1512998 1525644 Lele24g1723 24 22506237 22518532 ECH
Lele23g0222 23 1512998 1525644 Lele23g0222 23 1512998 1525644 ECH
Lele21g1786 21 25521658 25533237 Lele23g0222 23 1512998 1525644 hybridization
Lele22g1762 22 22861161 22872137 Lele23g0222 23 1512998 1525644 hybridization