Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele21g1786 ATGGCTGGTCTGGCTGAAGATCAAGGTCGAGGGGTTAGTAGGATAAAGGGCCCAGAGGCCGAGGAGGAGGAGAAGCGCTCGCAGAAGCCCGTGGTCTCCTTCGAGGAGGGTGCTAGTCAAGGAGAGAATAATATGGCACCCACATCAGGCAGTTCAATTCACCGCTCGAGTTCAAGGCCTCAGCTCGATGTCAGTAAAGCAAAAATCCAAGCGAATGTTGAGGAGAAGTATCCCACTATTCTGTTACCCAACCAATCTGATGATATATCTCACCTTGCTCTTGATCTTGGAGGTAAAATTAAGTTACTTAGTGCCATTGTACAAGACAATTGCGATCTGCTGCTGCTTCTTTCCAATCCTGAGAAGTTCTCTGTTCTTCTGTTTGTCACGAAGAAAGGGATTGAGCCATTGTTTTATGGAGTTCTTTGGGATCAATTCGAGACAAGCAAGGTTAACGAGTGCTTAGACTTCATTTATTCAAAGCAGCTTCACTGTGGTGGGTTGGAATCACGTTACTCTGATAATGTGGCTGACCAGAATGGCATAATTAAGGCTACAGGAGGTGGAGCCTACAAGTTTGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTATCGAAAAAGAGGATGAAATGGCCTGTCTTGTGTCAGGAGCAAATTTCCTGCTTAAGGCAATTCGTCATGAAGCTTTCACCCATATGGAAGGCAAAAAAGAATTCGTTCAAATTGACCCTAATGATCTGTTTCCTTATCTTCTAGTTAATATCGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGGAAATTTGAGAGGGTTAGTGGTACAAATGTTGGTGGTGGTACATATTGGGGCTTGGGAAGGCTTTTGACGAAGTGCAAGAGTTTTGATGAGTTGCTGGAGCTGAGTCAAAAAGGAGATAATAGGACCATTGATATGCTTGTTGGGGATATTTATGGTGGTATGGACTACTCTAAGATTGGCCTATCTGCTTCAACCATAGCTTCAAGTTTTGGCAAGACTATATCAGAAAAAAAGGAGCTTGAAGATTATAGACCTGAAGATATCTCGCTGTCTCTTTTACGAATGATTTCATACAATATTGGTCAGATATCTTACTTGAATGCACTGCGGTTTGGGCTGAAGCGTATCTTTTTTGGAGGATTTTTTATACGGGGTCATGCATATACCATGGACACTATTTCTTTTGCAGTTCAGTTCTGGTCTAAGGGGACAGCACAAGCAATGTTCTTGCGACATGAAGGATTCCTAGGAGCATTAGGTGCGTTTATGAGCTATGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGATTCCCAATGGGTGCACCATATACTGGAGGCAAGATTCATGGCCCTCCACTTGGTGATTTGAACGAGAAGATTTCATGGATGGAGAAGTTCTTACAAAAGGGAACTGAGATAACTGCTCCTGTGCCAATGATTCAACCTGGAACTACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTACTCTGCGATCTGATGCCAGTGCTCTAAATGTTGGTGTACTCCACCTAGTACCGACATTGGAGGTGTTTCCATTATTAGCAGACCCTAAAACGTATGAACCTAATACTATTGATCTCTCAGATCACAGTGAATTTGAATATTGGTTCAATATTCTGTTAGAGCACTTGCCTGATCTTGTAGACAAGGCTGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTTGCTCGTGCATTTTCTGCTCACTTGGCAAGATTGATGGAGGAACCTGCTGCATATGGAAAGTTAAGCTTAGCCAATCTATTGGAAATGAGAGAAGAGTGCTTGAGAGAATTCCAGTTTGTTGATGCCTATAGAAGTATAAAGCAGAGGGAAAATGAAGCTTCACTTGCTGTTTTACCTGACTTGTTGATGGAGCTTGACAGTATGGATGAGGAAACAAGACTACTTGCGCTAATTGAAGGTGTTCTCGCTGCAAACATTTTTGATTGGGGATCTCGAGCATGTGTGGATCTTTATCATCAAGGAACAATTATTGAAATTTATAGAATGAGCCGCAATAAAATGCAGAGACCTTGGCGGGTGGATAATTTTGATGACTTCAAAGAGAGAATGTTAGGGATTGGGGACAGAAAACCTACCCCACACAAAAGAGCTTTGCTGTTTGTGGATAATTCAGGGGCTGATGTTGTTCTAGGGATGATTCCCCTGGCACGAGAGCTCCTTCGGCGTGGAACTGAAGTGGTTCTGGTGGCAAATTCCCTTCCTGCAATAAATGATGCAACTGCAGTAGAACTTCCTGACATTGTAGCTGAGGCTGCCAAGCATTGTGACATTCTTAGGCGAGCCGCCGAAGCCGGAGGCTTAATCGTGGATGCAATGATTAGCCCTTCAAACAGCTCAAAAGAAAGTTCAACTTCAGTTCCCCTGATGGTTGTTGAGAATGGGTGCGGGAGTCCTTGTATAGACTTAAGACAGGTCAGCTCTGAGTTGGCTGCTGCTGCTAAGGATGCTGATTTGATAATTTTGGAAGGGATGGGTAGATCTCTTCATACCAACCTCAATGCCCGATTTAAGTGCGATGCCTTGAAGCTTGCAATGGTGAAAAACCAGAGGTTGGCTGAAAAGTTGATTAATGGCAAATTATACGACTGCATTTGCAAATATGAGCCTGCTAATTGA 2730 0.433 MAGLAEDQGRGVSRIKGPEAEEEEKRSQKPVVSFEEGASQGENNMAPTSGSSIHRSSSRPQLDVSKAKIQANVEEKYPTILLPNQSDDISHLALDLGGKIKLLSAIVQDNCDLLLLLSNPEKFSVLLFVTKKGIEPLFYGVLWDQFETSKVNECLDFIYSKQLHCGGLESRYSDNVADQNGIIKATGGGAYKFADLFKERLGVSIEKEDEMACLVSGANFLLKAIRHEAFTHMEGKKEFVQIDPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISEKKELEDYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGTAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMIQPGTTGLGGFEVPLSKGSTLRSDASALNVGVLHLVPTLEVFPLLADPKTYEPNTIDLSDHSEFEYWFNILLEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPAAYGKLSLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLLMELDSMDEETRLLALIEGVLAANIFDWGSRACVDLYHQGTIIEIYRMSRNKMQRPWRVDNFDDFKERMLGIGDRKPTPHKRALLFVDNSGADVVLGMIPLARELLRRGTEVVLVANSLPAINDATAVELPDIVAEAAKHCDILRRAAEAGGLIVDAMISPSNSSKESSTSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRSLHTNLNARFKCDALKLAMVKNQRLAEKLINGKLYDCICKYEPAN 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele21g1786 909 PIRSF PanK_long 44 909 IPR015844 GO:0004594|GO:0015937
Lele21g1786 909 SUPERFAMILY Actin-like ATPase domain 90 228 IPR043129 -
Lele21g1786 909 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 710 907 - -
Lele21g1786 909 MobiDBLite consensus disorder prediction 1 65 - -
Lele21g1786 909 SUPERFAMILY AF1104-like 524 907 IPR036075 -
Lele21g1786 909 MobiDBLite consensus disorder prediction 33 65 - -
Lele21g1786 909 MobiDBLite consensus disorder prediction 12 31 - -
Lele21g1786 909 Pfam Damage-control phosphatase ARMT1-like domain 614 893 IPR002791 -
Lele21g1786 909 PANTHER PANTOTHENATE KINASE 61 801 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lele21g1786 909 SUPERFAMILY Actin-like ATPase domain 200 433 IPR043129 -
Lele21g1786 909 Gene3D - 546 631 IPR035073 -
Lele21g1786 909 FunFam Pantothenate kinase 2 545 631 - -
Lele21g1786 909 Gene3D - 228 413 - -
Lele21g1786 909 FunFam Pantothenate kinase 2 83 241 - -
Lele21g1786 909 TIGRFAM panK_eukar: pantothenate kinase 142 432 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lele21g1786 909 FunFam Pantothenate kinase 2 228 413 - -
Lele21g1786 909 Pfam Fumble 144 431 IPR004567 GO:0004594|GO:0005524|GO:0015937
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele21g1786 Lele-ChrLele21 25521658 25533237 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1786 21 25521658 25533237 Lele22g1762 22 22861161 22872137 ECH
Lele21g1786 21 25521658 25533237 Lele21g1786 21 25521658 25533237 ECH
Lele21g1786 21 25521658 25533237 Lele23g0222 23 1512998 1525644 hybridization
Lele21g1786 21 25521658 25533237 Lele24g1723 24 22506237 22518532 hybridization