Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1794 ATGGGAAAGAACCGCAAAAGGAAGCAGCCAGAGGGTGATAGAGAGTCGAAGTTAAATTCTTCATTCGAGACTCGGCCAAAATCCGCGCGAGCCACGAATGGCTCCATTGAAAACCTGAAAGATCCGTTCCCAAGTCACGCTCGACCCACCCCCGAAGAATGCCGAGCCGTCCGAGACACTTTATTGGCCCGACACGGTTTTCCCCAAGAGTTCGTCAAGTATCGCCGAAAATCAACGGACGATGCTGTGAAATTGGCACAGGACGACAACACTGGGTTACCCGCCCAAGAAGAGAGTGTTCTGGACGGTTTGGTTCGGACCGTGCTGTCACAGAATACTACTGAAGCAAATTCTCAAAGGGCTTTTGCTTCCCTCAAATCTGCCTTTCCTACTTGGGAAGATGTTCTTAGTGCTGGCGCCAAGGATGTGGAGGATGCCGTTCGATGTGGTGGTTTGGCTCCAACTAAGGCTTCTTGTATTAAGAATGTATTAAGTTGCTTGCTTGAGAGAAGAGGAAAATTATGCTTGGAGTATTTGCGAGACTTGTCTCTTGATGAAATTAAGTCGGAGCTTTCTCTTTTCAAAGGAATTGGTCCCAAGACAGTATCTTGTGTCCTAATGTTCAATCTTCAGCGAGATGATTTTCCTGTAGACACACATATATTTGAGATTGCAAAAAGCATTGGGTGGGTACCAGCTGTTGCGGATAGAAACAAGACCTATCTTCATCTAAACCGCCGGATCCCAAAGGAACTCATGTTTGACTTGAACTGTCTTCTGTATACACACGGTAAGCTCTGTAGTAAATGCACCAGTAAGAGGGGTAAGCAACCTAAGAAGACATGTGATAACTCTTGCCCTCTGTTGAAATACTGTGAGGGTTCGATATGA 891 0.4624 MGKNRKRKQPEGDRESKLNSSFETRPKSARATNGSIENLKDPFPSHARPTPEECRAVRDTLLARHGFPQEFVKYRRKSTDDAVKLAQDDNTGLPAQEESVLDGLVRTVLSQNTTEANSQRAFASLKSAFPTWEDVLSAGAKDVEDAVRCGGLAPTKASCIKNVLSCLLERRGKLCLEYLRDLSLDEIKSELSLFKGIGPKTVSCVLMFNLQRDDFPVDTHIFEIAKSIGWVPAVADRNKTYLHLNRRIPKELMFDLNCLLYTHGKLCSKCTSKRGKQPKKTCDNSCPLLKYCEGSI 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1794 296 Gene3D - 93 293 IPR023170 -
Lele22g1794 296 MobiDBLite consensus disorder prediction 1 50 - -
Lele22g1794 296 MobiDBLite consensus disorder prediction 1 21 - -
Lele22g1794 296 CDD ENDO3c 104 264 IPR003265 GO:0006284
Lele22g1794 296 Gene3D Hypothetical protein; domain 2 94 216 - -
Lele22g1794 296 SMART endo3end 109 266 IPR003265 GO:0006284
Lele22g1794 296 MobiDBLite consensus disorder prediction 22 39 - -
Lele22g1794 296 Pfam HhH-GPD superfamily base excision DNA repair protein 105 249 IPR003265 GO:0006284
Lele22g1794 296 PANTHER - 3 293 - -
Lele22g1794 296 SUPERFAMILY DNA-glycosylase 97 293 IPR011257 GO:0003824|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1794 Lele-ChrLele22 23092794 23095325 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1794 22 23092794 23095325 Lele17g1015 17 20870932 20871971 CCT
Lele22g1794 22 23092794 23095325 Lele18g0523 18 3090036 3091063 CCT
Lele22g1794 22 23092794 23095325 Lele19g0541 19 3136055 3138360 CCT
Lele22g1794 22 23092794 23095325 Lele20g0910 20 15438979 15439905 CCT
Lele22g1794 22 23092794 23095325 Lele22g1794 22 23092794 23095325 ECH
Lele22g1794 22 23092794 23095325 Lele24g1753 24 22732059 22741175 hybridization