Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0541 ATGAATGAGATTTTGAAGCCAATAAGGTACAGCAGCCCAGAGGAGGAGGAGAAGAAAAAGTACAAGGTGGGAAATTGTCAGGCCATTGATTCAGCTTCTCTGGTGATTCAGCAACCAAACGGGAAAGCAGAGAGGTTGTATTGGCCGGTGAGCGCCGGCGAGGTTATGAAGACGAATCCTGGTCACTATGTTGCTCTTCTGATCTCCTCCACATTGTGTCCTTCTCAGGACAATGAAAAATGTCATAATAATAAGAATAACGACAACCCCAGCAACAACCCAGTTCGTATAACTCGCATCAAGCTTCTCAAACCCACCGATACCCTCCTCCTTGGCCAAGTTTACAGACTTATCAGTACTCAAGAGGTTATGAAGGGTCTGTTGGCAAAGAAGCAAGCAAAGATGCAGAAAGGCATGGCAGATTCTGCGCACAAGTTGGATTGGGTGAAGGGAAAAGCAGGTTTGGAGACAGATAAAGCAACAACAAGAAGGACTGAGACAGAGGACAAACAGGTAATTAAAGCAGAGAGGCAGAGGGCAAGAACAGGAGGATCAGGAAATAGTGGGAGTATCAGTATCACAGCTAAGTCAAGAACATGGCAACCTTCTTTACTAAGTATTTCAGAGTCAGCAAGCTGA 639 0.4538 MNEILKPIRYSSPEEEEKKKYKVGNCQAIDSASLVIQQPNGKAERLYWPVSAGEVMKTNPGHYVALLISSTLCPSQDNEKCHNNKNNDNPSNNPVRITRIKLLKPTDTLLLGQVYRLISTQEVMKGLLAKKQAKMQKGMADSAHKLDWVKGKAGLETDKATTRRTETEDKQVIKAERQRARTGGSGNSGSISITAKSRTWQPSLLSISESAS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0541 212 MobiDBLite consensus disorder prediction 157 195 - -
Lele19g0541 212 Pfam PADRE domain 24 209 IPR025322 -
Lele19g0541 212 PANTHER EXPRESSED PROTEIN 24 210 - -
Lele19g0541 212 MobiDBLite consensus disorder prediction 181 195 - -
Lele19g0541 212 MobiDBLite consensus disorder prediction 157 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0541 Lele-ChrLele19 3136055 3138360 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1794 22 23092794 23095325 Lele19g0541 19 3136055 3138360 CCT
Lele24g1753 24 22732059 22741175 Lele19g0541 19 3136055 3138360 CCT
Lele17g1015 17 20870932 20871971 Lele19g0541 19 3136055 3138360 hybridization
Lele18g0523 18 3090036 3091063 Lele19g0541 19 3136055 3138360 hybridization