Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1015 ATGGGAAATTGTCAGGCCATTGATTCAGCTTCTCTGGTGATTCAGCAACCAAACGGGAAAGCAGAGAGGTTGTATTGGCCGGTGAGCGCCGGCGAGGTTATGAAGACAAATCCTGGTCACTATGTTGCTCTTCTGATCTCCTCCACATTGTGTCCTTCTCAGGACAGTGAAAAATGTCATGATAATAAGAATAACGACAACCCCATCAACAACCCAGTTCGTATAACTCGCATCAAGCTTCTCAAACCCACCGATACCCTCCTCCTTGGCCAAGTTTACAGACTTATCAGTACTCAAGAGGTTATGAAGGGTCTGTTTGCAAAGAAGCAAGCAAAGATGCAGAAAGGCATGACAGATTCTGCGCACAAGTTGGATTGGGTGAAGGGAAAAGCAGGTTTGGAGACAGATAAAGCAACAACAAGAAGGTCTGAGACAGAGGACAAACAGGTAATTAAAGCAGAGAGACAGAGGGCAAGAACAGGAGGATCAGGAAATAGTGGGAGTATCAGTATCACAGCTAAGTCAAGAACATGGCAACCTTCTTTACTAAGTATTTCAGAGTCAGCAAGCTGA 573 0.4503 MGNCQAIDSASLVIQQPNGKAERLYWPVSAGEVMKTNPGHYVALLISSTLCPSQDSEKCHDNKNNDNPINNPVRITRIKLLKPTDTLLLGQVYRLISTQEVMKGLFAKKQAKMQKGMTDSAHKLDWVKGKAGLETDKATTRRSETEDKQVIKAERQRARTGGSGNSGSISITAKSRTWQPSLLSISESAS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1015 190 MobiDBLite consensus disorder prediction 135 173 - -
Lele17g1015 190 MobiDBLite consensus disorder prediction 159 173 - -
Lele17g1015 190 PANTHER EXPRESSED PROTEIN 1 188 - -
Lele17g1015 190 MobiDBLite consensus disorder prediction 135 155 - -
Lele17g1015 190 Pfam PADRE domain 1 187 IPR025322 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1015 Lele-ChrLele17 20870932 20871971 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1794 22 23092794 23095325 Lele17g1015 17 20870932 20871971 CCT
Lele24g1753 24 22732059 22741175 Lele17g1015 17 20870932 20871971 CCT
Lele17g1015 17 20870932 20871971 Lele19g0541 19 3136055 3138360 hybridization
Lele17g1015 17 20870932 20871971 Lele20g0910 20 15438979 15439905 hybridization