Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele22g1793 ATGATTCGTCGGAATTATTTGAGCTGGGCTGTACTTTGCTTTCTGGTACTTTCGATACTCTTTGACCCGTCCGTGTCTGAATCACAATCCCGTTGGGCTGCCAAGAAAAAACGCATGAGAGAGAAAGCTCGCGAGATGTTTTACCATGCGTATGACAACTACATGACTCATGCATTCCCGCACGATGAGCTAAAGCCTCTAACCAAAACATTCACGAACTCCCTTAGTGAGCTGGGAAATTTGAACCTTGAACACTTGCCTCAAGACTACAATGGATCAGCCCTTACACTTATTGAATCATTGTCTAGCCTGGTTATTATGGGCAACAGCACTGAATTCAAGAGGGCAGTGCTCTGGCTTTCTGAAAATCTGACATTTGATGTTGATGCTCGAATAAATCTTTTTGAGTGCAACATTAGAGTTCTTGGAGGACTTGTCTCTGCTCATCTTCTTGCGTCTGATTCTGCAAATAATTTGTTTCAAGAAGCCTACAAAAATCAGCTGCTAGTACTGGCTGAAGATTTAGGGAACCGCTTTCTACCAGCATTTAATACACCCACAGGATTGCCATATGCCTGGATCAACTTAAAGTATGGAGTAATGGAGAATGAGACTACAGAAACAAGCACTTCGGGTTGTGGTTCTTTGATTGTTGAAATGGGTGCTTTATCAAAATTGACTGGTGATCCTATATATGAATCAGTGGCTTTACGTGCTCTACACAAGCTATGGAGCATGCGGAGTTCATTAAATTTATTTGGAACTACTCTAGATGTGGAAAATGGGGAATGGATAGAGTTTTCATCAGGAATTGGAGCGGGGGTTGATTCGTTCTATGAGTATCTCCTTAAAGCCCATATCCTTTTTGGGAAGGAAGACTTCTGGAGAATGTTTCATTCTGCTTATGTTGCTGTGCAGAAATATTTCAGACACGGCCCTTGGTACCATGAAGCTGATATGAGGACAGGAAGAGCAACTTATTGGCAACTTACAAGCCTTCAAGCATTTTGGCCTGGCCTACAGGTTCTCATTGGGGATATTGCAGCTGCTAATTCAACGCATCGTGAGTTCTACCATGTGTGGGAGAAATTTGGAGTGCTTCCGGAGAGGTATTTGCTGGACCATCAGATGCTGCATCCTACTGAAAAATATTATCCATTACGCCCTGAATTTGCAGAGTCAACGTTCTATTTATATCAAGCAACTAAAGATCCATGGTATATTGAAGTGGGTGAATTAATAATTAATTCCCTCAGCACATACACCAGGGTTGAAGGTGGGTTTGCAAGCATCAGGGATGTGAAAACAATGGAGCTGGAAGATCATCAACATAGTTTTTTCCTTGCTGAAACGTGCAAATATTTATATCTTCTATTTGATGATTCATTTTTAAAAGGTGGTAATTACATATTTACCACTGAAGGCCATCCCCTTCCAGTACTAAGTGTTTGGCAAGAAAGGCTCCCAGAAACTTACGTTCCTACTAATTGGACTTACATGAAGAGTGAAAAGGCACATAAAATAAGTGCAATGTCAATGCAAGTATGTCCTGCAGTGACTCTAAGTTCAGGGAAACATATTGAGAGTGGATGCCATGTACCAGATGGCCGCAGTGACCACAGGTGTTTCGCGGATGAAGATTGTGGAGTTGACTCCACAACATGCAGAAGAAGGTCTTGTAGTATAGCTGGTTATTGTGGGTTATGGCTCTCCATATGA 1719 0.4188 MIRRNYLSWAVLCFLVLSILFDPSVSESQSRWAAKKKRMREKAREMFYHAYDNYMTHAFPHDELKPLTKTFTNSLSELGNLNLEHLPQDYNGSALTLIESLSSLVIMGNSTEFKRAVLWLSENLTFDVDARINLFECNIRVLGGLVSAHLLASDSANNLFQEAYKNQLLVLAEDLGNRFLPAFNTPTGLPYAWINLKYGVMENETTETSTSGCGSLIVEMGALSKLTGDPIYESVALRALHKLWSMRSSLNLFGTTLDVENGEWIEFSSGIGAGVDSFYEYLLKAHILFGKEDFWRMFHSAYVAVQKYFRHGPWYHEADMRTGRATYWQLTSLQAFWPGLQVLIGDIAAANSTHREFYHVWEKFGVLPERYLLDHQMLHPTEKYYPLRPEFAESTFYLYQATKDPWYIEVGELIINSLSTYTRVEGGFASIRDVKTMELEDHQHSFFLAETCKYLYLLFDDSFLKGGNYIFTTEGHPLPVLSVWQERLPETYVPTNWTYMKSEKAHKISAMSMQVCPAVTLSSGKHIESGCHVPDGRSDHRCFADEDCGVDSTTCRRRSCSIAGYCGLWLSI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele22g1793 572 Gene3D - 28 490 IPR012341 GO:0005975
Lele22g1793 572 SUPERFAMILY Seven-hairpin glycosidases 37 492 IPR036026 GO:0004571|GO:0005509|GO:0016020
Lele22g1793 572 Pfam Glycosyl hydrolase family 47 46 479 IPR001382 GO:0004571|GO:0005509|GO:0016020
Lele22g1793 572 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 10 504 IPR044674 GO:0004571|GO:1904380|GO:1904382
Lele22g1793 572 PRINTS Glycosyl hydrolase family 47 signature 272 289 IPR001382 GO:0004571|GO:0005509|GO:0016020
Lele22g1793 572 PRINTS Glycosyl hydrolase family 47 signature 181 200 IPR001382 GO:0004571|GO:0005509|GO:0016020
Lele22g1793 572 PRINTS Glycosyl hydrolase family 47 signature 445 465 IPR001382 GO:0004571|GO:0005509|GO:0016020
Lele22g1793 572 PRINTS Glycosyl hydrolase family 47 signature 131 149 IPR001382 GO:0004571|GO:0005509|GO:0016020
Lele22g1793 572 PRINTS Glycosyl hydrolase family 47 signature 46 66 IPR001382 GO:0004571|GO:0005509|GO:0016020
Lele22g1793 572 PRINTS Glycosyl hydrolase family 47 signature 329 345 IPR001382 GO:0004571|GO:0005509|GO:0016020
Lele22g1793 572 PRINTS Glycosyl hydrolase family 47 signature 386 410 IPR001382 GO:0004571|GO:0005509|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele22g1793 Lele-ChrLele22 23086584 23091140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele22g1793 12 569 Glycoside Hydrolase AT1G27520 74.733 0.0 887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele22g1793 22 23086584 23091140 Lele17g1016 17 20877324 20881506 CCT
Lele22g1793 22 23086584 23091140 Lele18g0522 18 3079746 3084247 CCT
Lele22g1793 22 23086584 23091140 Lele19g0540 19 3127059 3131830 CCT
Lele22g1793 22 23086584 23091140 Lele20g0911 20 15446561 15451025 CCT
Lele22g1793 22 23086584 23091140 Lele22g1793 22 23086584 23091140 ECH
Lele22g1793 22 23086584 23091140 Lele23g0191 23 1240113 1249020 hybridization