Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0540 ATGACACTGCTTTGTGCTCATTCTGTAAAGGCCCTTATCGTTTCTCGTAGCATCGGAGCCTGCTTTACTTCACCTACACAAGAACTCCATCACTTCACTTTGTTTTCCTTGCTCGACCATTGTGAAAAGGTAGCTTTTTCTCTCTGGAACTTCTGGTTCATGACATAGAGTGGCAAGGTAGGAAGCAAGAGAGAGAGAGAGAGAGAAGCACAAGTTATGGCAGCAGGAGGAGGAGGAGGAGGAGGCGGAGGCGGAGGAGCTCCGGCGCCGAAAGCGGGTGAACCACAGCCACACCCACCAAAGGATCAGCTACCAAATATTTCTTATTGCATTACTAGTCCTCCTCCATGGCCTGAGGCTATACTTCTTGGTTTTCAACATTATCTTGTGATGCTTGGCACAAGTGTTCTCATTCCCACAGCTCTTGTTCCTCAGATGGGAGGTGGCAACGAGGAGAAGGCAAAAGTCATCCAAACGCTACTTTTTGTTGCTGGTATAAACACATTGTTGCAAACACTGTTAGGAACCCGACTGCCCGCTGTAATTGGAGGGTCTTATACCTTTGTTCCAACCACAATATCAATTATACTGGCTGGTCGTTTTAGTGATGTTGCGGATCCTATCGAGAGATTCAAGAGGATAATGCGGGCAATCCAGGGTTCCCTTATTGTTGCTTCAACTCTTCAAATAGTATTAGGCTTTAGTGGCCTTTGGCGCAATGTTGCCAGGTTTTTAAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTCGGGCTATACGAATTAGGTTTTCCTGGGGTCGCTAAATGTGTGGAGATCGGATTGCCAGAGCTTATATTGATAGTATTTGTTTCACAGTACGTGCCCCATGTGCTACACTCAGGGAAACATATCTTCGACCGCTTTGCTGTTTTATTTACAATTGCAATTGTGTGGATATATGCCCATGTACTCACTGTCGGAGGGGCCTATAACAATGCCGCACCTAAAACACAAGCAACCTGCCGCACTGATCGTGCTGGACTGATAGACGGTGCTCCATGGATCAGCGTTCCATATCCCTTTCAATGGGGAGCACCTTCATTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCTTCCTTTGTTGCTCTTGTAGAGTCCAGCGGAGCTTTTATTGCTGTGTATAGGTATGCTAGTGCAACTCCAATGCCACCATCTATTCTCAGTCGGGGTATTGGGTGGCAGGGAGTTGCCATTCTTCTATCGGGATTGTTTGGAACTTCCACAGGATCCTCTGTATCAGTAGAAAATGCCGGTCTTCTAGCTTTGACCCGAGTTGGCAGTCGAAGAGTTGTGCAAATATCAGCTGGATTTATGATTTTCTTTTCAATCCTTGGGAAATTTGGAGCAGTTTTCGCCTCCATACCACCACCCATCGTTGCTGCTTTGTATTGCTTGTTCTTCGCATATGTCGGTGCTGGAGGTCTCAGTTTTCTTCAGTTCTGCAACCTCAACAGTTTCAGAACGAAGTTCATACTAGGCTTCTCCATCTTCTTGGGGTTGTCGGTGCCACAGTACTTCAACGAGTACACAGCAATCAACGGTTTTGGGCCCGTCCACACAAGCGCCAGATGGTTCAACGACATAGTGAATGTACCGTTCCAATCAGAAGCATTTGTCGCGGGGTGTGTTGCCTATTTTCTGGACAACACCATACATAAGAAAGATGGGGCCATCCGGAAAGACAGAGGAAAGCATTGGTGGGACAAGTATAAATCCTTCAAGGGTGATACCAGAAGTGAGGAGTTCTATTCTCTGCCTTTTAATCTCAACAAATACTTCCCATCTGTGTAA 1842 0.4636 MTLLCAHSVKALIVSRSIGACFTSPTQELHHFTLFSLLDHCEKVAFSLWNFWFMTXSGKVGSKREREREAQVMAAGGGGGGGGGGGAPAPKAGEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHYLVMLGTSVLIPTALVPQMGGGNEEKAKVIQTLLFVAGINTLLQTLLGTRLPAVIGGSYTFVPTTISIILAGRFSDVADPIERFKRIMRAIQGSLIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCVEIGLPELILIVFVSQYVPHVLHSGKHIFDRFAVLFTIAIVWIYAHVLTVGGAYNNAAPKTQATCRTDRAGLIDGAPWISVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFIAVYRYASATPMPPSILSRGIGWQGVAILLSGLFGTSTGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSIFLGLSVPQYFNEYTAINGFGPVHTSARWFNDIVNVPFQSEAFVAGCVAYFLDNTIHKKDGAIRKDRGKHWWDKYKSFKGDTRSEEFYSLPFNLNKYFPSV 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0540 613 Pfam Permease family 119 523 IPR006043 GO:0016020|GO:0022857|GO:0055085
Lele19g0540 613 MobiDBLite consensus disorder prediction 69 107 - -
Lele19g0540 613 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 89 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0540 Lele-ChrLele19 3127059 3131830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0540 89 613 Organic Solute Cotransporters AT5G49990 81.369 0.0 880
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1817 21 25774374 25776213 Lele19g0540 19 3127059 3131830 CCT
Lele22g1793 22 23086584 23091140 Lele19g0540 19 3127059 3131830 CCT
Lele23g0191 23 1240113 1249020 Lele19g0540 19 3127059 3131830 CCT
Lele17g1016 17 20877324 20881506 Lele19g0540 19 3127059 3131830 hybridization
Lele18g0522 18 3079746 3084247 Lele19g0540 19 3127059 3131830 hybridization