Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0911 ATGGCAGGAGGAGGCGGAGGAGCTCCGGCACCAAAAGCAGATGAACCACAGCCACACCCACCAAAGGATCAGCTACCAAATATTTCTTATTGCATTACCAGTCCTCCACCATGGCCCGAAGCTATACTGCTTGGTTTTCAACATTATCTTGTGATGCTTGGTACAACTGTTCTCATTCCCACGGCTCTTGTTCCTCAGATGGGAGGTGGCAACGAGGAGAAGGCAAAAGTCATCCAAACACTACTTTTTGTTGCTGGCATAAACACATTGTTACAAACACTGTTTGGAACTCGATTGCCTGCTGTAATTGGAGGGTCTTATACCTTTGTTCCAACCACAATATCAATTATACTTGCCGGTCGATTTAGTGATGTTGCGGATCCCATCGAGAGATTTAAGAGGATAATGCGGGCAATCCAGGGGTCCCTTATTGTTGCTTCAACTCTTCAAATAGTATTAGGCTTTAGTGGCCTTTGGCGCAATGTTGCCAGGTTTTTAAGTCCACTTTCAGCAGTTCCTTTGGTATCTCTTGTTGGTTTCGGGCTATACGAATTAGGTTTTCCCGGGGTTGCTAAATGTGTGGAGATCGGATTGCCAGAGCTTATATTGATAGTATTTGTTTCACAGTACATGCCCCATGTGCTACACTCGGGGAAACACGTCTTTGAGCGCTTTGCTGTTGTATTTACAATTGCAATTGTGTGGATATATGCCCATGTACTCACTGTTGGAGGGGCCTATAACAATGCTGCACCTAAAACACAAGCAACCTGCCGCACTGATCGCGCTGGACTGATAGATGGTGCTCCATGGATCAGCGTTCCATATCCCTTTCAATGGGGAGCGCCTTCTTTTGATGCAGGTGAAGCCTTTGCCATGATGATGGCTTCCTTTGTTGCTCTTGTAGAGTCCAGCGGAGCTTTTATTGCTGTGTATAGGTACGCTAGTGCAACTCCAATGCCACCATCTATTCTCAGCCGGGGTATTGGGTGGCAGGGAGTTGCCATTCTTCTATCGGGATTGTTTGGAACTTCCACAGGATCCTCTGTATCAGTAGAAAATGCTGGTCTTCTAGCTTTGACCCGGGTTGGCAGTCGAAGAGTCGTGCAAATATCAGCTGGATTTATGATTTTCTTTTCAATTCTTGGGAAATTTGGTGCAGTTTTCGCCTCCATACCACCACCCATCGTTGCTGCTTTTTATTGCTTGTTCTTCGCATATGTCGGTGCTGGAGGTCTCAGTTTTCTTCAGTTCTGCAACCTCAACAGTTTCAGAACAAAGTTCATATTGGGCTTCTCTATCTTCTTGGGGTTGTCAGTGCCACAATACTTCAACGAGTACACAGCAATCAACGGTTTCGGTCCCGTCCACACAAGCGCCAGATGGTTCAATGACATAGTGAATGTGCCGTTCCAATCAGAAGCATTTGTCGCAGGTTGTGTGGCATATTTTCTGGACAACACCATACATAAGAAAGATGGGGCCATTCGGAAAGACAGGGGAAAGCATTGGTGGGACAAGTATAGATCCTTCAAGGGTGATACCAGAAGTGAGGAGTTCTATTCTCTGCCTTTTAATCTCAATAAATACTTCCCATCTGTGTAA 1605 0.4573 MAGGGGGAPAPKADEPQPHPPKDQLPNISYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTALVPQMGGGNEEKAKVIQTLLFVAGINTLLQTLFGTRLPAVIGGSYTFVPTTISIILAGRFSDVADPIERFKRIMRAIQGSLIVASTLQIVLGFSGLWRNVARFLSPLSAVPLVSLVGFGLYELGFPGVAKCVEIGLPELILIVFVSQYMPHVLHSGKHVFERFAVVFTIAIVWIYAHVLTVGGAYNNAAPKTQATCRTDRAGLIDGAPWISVPYPFQWGAPSFDAGEAFAMMMASFVALVESSGAFIAVYRYASATPMPPSILSRGIGWQGVAILLSGLFGTSTGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPPPIVAAFYCLFFAYVGAGGLSFLQFCNLNSFRTKFILGFSIFLGLSVPQYFNEYTAINGFGPVHTSARWFNDIVNVPFQSEAFVAGCVAYFLDNTIHKKDGAIRKDRGKHWWDKYRSFKGDTRSEEFYSLPFNLNKYFPSV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0911 534 MobiDBLite consensus disorder prediction 1 28 - -
Lele20g0911 534 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 9 532 - -
Lele20g0911 534 Pfam Permease family 40 444 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0911 Lele-ChrLele20 15446561 15451025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0911 10 534 Organic Solute Cotransporters AT5G49990 81.749 0.0 882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele21g1817 21 25774374 25776213 Lele20g0911 20 15446561 15451025 CCT
Lele22g1793 22 23086584 23091140 Lele20g0911 20 15446561 15451025 CCT
Lele23g0191 23 1240113 1249020 Lele20g0911 20 15446561 15451025 CCT
Lele17g1016 17 20877324 20881506 Lele20g0911 20 15446561 15451025 hybridization
Lele18g0522 18 3079746 3084247 Lele20g0911 20 15446561 15451025 hybridization