Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1141 ATGGGAAGAAGTCTCAGTCCAGTAATCCGGCGAGAGCTTGCAAACCTTGACAAAGATGCGGACAGCCGCAAGTGTGCAATGAAAGCCCTGAAGTCATACGTGAAAGATTTGGATTTTAAAACCATTCCTATCTTCCTCGCCCAAGTTTCTGAAACCAAGGATACCGGCTCATTATCAGGAGAATTCACAATTTCACTCTATGAAGTTCTTGCTCGAGTTCATGGTGTCAAGATTGTTCCTGTGATAGACAGCATCATGGCATCCATAGTACAAACGTTAGCTTCAAGTGCAGGGTCTTTCCCACTTCAGCAGGCTTGCTCAAAGGTGGTCCCAGCTATTGCAAGATATGGAATTGACCCCACAACCCCAGAAGACAGAAAGAGGCATATAATTCATTCCCTTTGTAAGCCACTTTCTGATTCTCTCACTTCTTCTCATGAGAGCCTAGCTTCAGGAGCATCCCTTTGCTTAAAGGCTCTTGTGGATTCAGATAACTGGAAGTTTGCTTCAGATGACGTAGTCAATAGGGTCTGCCTGAATGTTGCTGTAGCTTTAGAGGGGAGGTCCACCCAGAATAACTCACATTTGGGTTTGGTAATGGCCTTAGCTAAACGCAATGCTTTGATTGTTGAAGCATATGCAAGATTGCTTATACAATCTGGATTGAGAATATTGAATGCTGGGCTTATGGAGGGGAATTCTCAGAAGAGACTGTCAGCCATTCAAATGGTAAACTTCTTGATGAAATGTCTAGACCCCCGAAGCATATTCTCAGAACTCGATTTGATAATTCTGGAGCTGGAGAAGTGCCAGTCTGATAAAATGGCATATGTGAAAGGTGCTGCATTTGAAGCTTTGCAAACTGCTAAGAGAATTGCAGCTGACAAAAAATCAAGATATATTAAAAGTCCTGGCTCAGTGACTGGCTCAACTTTTAGCAAGGGAGACCACAATGAATGGGAAAACTTTTCTTGTCAAGGAGAGCATACTCCTAGATCTATTTCACCAGAATCACGGACTCTGGACTTCTTTACAGGATATGAATCAGTGAGCGAGTCTCCCGTTGCAATGAGCCAAACTTCTCAGACTTCGAACTATGAGCGTCGAAGTGTAAATAGGAAGCTTTGGAGCCAGGAAAATGCAGGAGTTGATGTGTCTCTCAAGGATGGCCTCTTTTCAGAGGTTGTGAAGAGAAATGATATCTCAAAAAAATGGTTAGAGCAATCTGCGAATCATGAGGTTTCAACAGAGGAGTTTGCTGGATTCATGCATCAGAATCCTAGGTTTGGAGTATCCAGAAGCACCACCACAAGTCCGCTGAGGTCTCGAGCACAGGTTAATGTAGACAACATAAAAATCTTCAAGACCCCTAGAAAGCTCATTCAGTCTCTGCAAGACCCATTTGATGTGACTTCCGGTAGCTCTTCCAGTAGCTCTGAGAAACAAAACAGACTGTTTAGGAGTTTATCCTCAGGCAATATTGAGTGGAGTCTAACATCTGAATGCGACCAGAATGGTTTCTCACATGAAAATAATGATTCTAAAGAGAATGGAAGCTTATCATATGATGATGTACAGATACAAGGTGGTCAGGAGTCAGTCTCAATAACAGATGAGCTTTCTGGTGATGTTGACATGCAGATGCATCCTGAGGTAGTTACCAGGAGTGAAACTAGTGCTCAGAGAATTGGCATGGAAAAAACTCTGCGAAGGGCAACGTTCAAATTGGTTTGTGGTCTCTCGTTTGCTCTACTTGCAGTGGCTACACCTCTTGTATGGATCAACGGTCAGGACGAAGGCCATTATCTTGTCCCGACATAA 1821 0.4333 MGRSLSPVIRRELANLDKDADSRKCAMKALKSYVKDLDFKTIPIFLAQVSETKDTGSLSGEFTISLYEVLARVHGVKIVPVIDSIMASIVQTLASSAGSFPLQQACSKVVPAIARYGIDPTTPEDRKRHIIHSLCKPLSDSLTSSHESLASGASLCLKALVDSDNWKFASDDVVNRVCLNVAVALEGRSTQNNSHLGLVMALAKRNALIVEAYARLLIQSGLRILNAGLMEGNSQKRLSAIQMVNFLMKCLDPRSIFSELDLIILELEKCQSDKMAYVKGAAFEALQTAKRIAADKKSRYIKSPGSVTGSTFSKGDHNEWENFSCQGEHTPRSISPESRTLDFFTGYESVSESPVAMSQTSQTSNYERRSVNRKLWSQENAGVDVSLKDGLFSEVVKRNDISKKWLEQSANHEVSTEEFAGFMHQNPRFGVSRSTTTSPLRSRAQVNVDNIKIFKTPRKLIQSLQDPFDVTSGSSSSSSEKQNRLFRSLSSGNIEWSLTSECDQNGFSHENNDSKENGSLSYDDVQIQGGQESVSITDELSGDVDMQMHPEVVTRSETSAQRIGMEKTLRRATFKLVCGLSFALLAVATPLVWINGQDEGHYLVPT 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1141 606 FunFam protein SINE1 isoform X1 2 314 - -
Lele16g1141 606 SUPERFAMILY ARM repeat 11 288 IPR016024 -
Lele16g1141 606 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 4 537 IPR033337 GO:0005874|GO:0008017
Lele16g1141 606 Gene3D - 119 305 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1141 Lele-ChrLele16 6401908 6403817 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0503 06 3057560 3060948 Lele16g1141 16 6401908 6403817 CCT
Lele05g0678 05 4005229 4011441 Lele16g1141 16 6401908 6403817 CCT
Lele13g1334 13 23323299 23325217 Lele16g1141 16 6401908 6403817 hybridization
Lele14g1239 14 21641592 21649221 Lele16g1141 16 6401908 6403817 hybridization