Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0678 ATGTCTTTTTGGGCGCTAGAATCACTTGCACCTACTGTCAGAAATATAAGAGTTCAACGCTTGTTTGCCTTATCACATAGTGTATGTTATGGTCTTTTGAACTTATCCTTGCATAATCAACAGTGTTTTATTGGAGATATGATCGCTTGTGACAATAATGAAAATGCTTTGAATGGCTTTCTTCCTAGTGCAGCGGAGGTCAGAGTGCATTTAATCCAAGCAATGATATCCTGGCCGCAGGAAAGAAACAGAGCAGAGGTGGAGCCATTATCCTTTAATCTGCGAACTAAGGGATTGGTCAATCATCATCGTGTTGGACTGATTTTTTCTGTCCATCTGAACCCCTTGCTTATTTTGGGCCCCGCGATGGAAAGAAATCTCAGTCCAATACTGCGGCAAGAGATAGAAAATCTTGAAAAAGATGCAGAGTGTCGAAAATCTGCGATAGAAGCGTTACAAGCATACGTGAAAGATTTGGATTTTAAGAACATTCCTATCTTTCTTAACCAAATTTCTGAAATCAAAGAAACCTGTTCTTTATCTGGAGAATTCATAATTTCACTTTATGAAGTTCTCGCTCGAGTTCACGGTGTCAAAATTGTTCCCATGGTAGACAAGATCATGGAATCCATAGTCCAGAACTTAGCTTCGAGCGAGGGGTCTTTCCCTCTTCGTCAAGCTTGCTCAAGGGTGGTTTCGGCAATTGCTAGATATAGCATTGAACCCACAACCCCGGAAGACAAGAAGAGGCATGTAATTTGTTCACTTTGTAAGCCTCTTTCAGATTCTCTCTCAAGTTCCCAAGAGTGCCTAACTTCAGGAGCTGCCCTTTGCTTAAATGCTCTTGTGGACTCTGATAACTGGCGATTTGTTTCAGATGAAACAGTCAGCAGGATTTGCCAAAATGTTGCTGTGGCATTAGATGGAAAGCCCAACCACTGCAATTCGCACACGGGTCTGGTTATGGCCTTAGCGAAGCGCAATGCTTTAATTGTTGAAGCCTATGCAAGGTTGCTCATACAAGCTGGACTAATAATACTGAATGCTGGTCATGAGGAGGGGAATTCTCTGAGGCGCTTGTCAGCCATTCAAATGTTGAACTCATTGATCAAATTTTTGGACCCCAGGAGTGTATTCTCTGAGCTTCAATTGATCATTGAGGCGATGGAGAAGTGTCAGTCTGATACAATGGCTTATGTTAGGGCTGCAGCATTTGAAGTTTTGCAAGCTGCTGAGGAAATAGCATTTGGCAAGAAGTCGACGTATGCAAACAGTCATGATTCGATTGTTGGGTCAAGCTTAAGTAGAAGTGAGGGGGAAGATGTTTCTGGTGATGAGGACCGTTCTCCTGCATCTATCTCACCGGAACCACATATCAAGGGCTATTTCCCTGGATATCATTCAATTGTTGAGTCGCCAATATTAACCAACCAAGCTTCTCGGCAGAACTTGAACAATGAGCATAGGTCTTTGAAACCTAAGCACGGAGTATTAAGAAGTAACACCAAAAGTCCCCAAAGGTCACGTGCCCATGCTACCCCGGACAGTGTTAGAATATTCGCAACCCCTACAAAACATATTCACTCTCTCCAGTATCCAAGTGATGTGAACTTGAGTTGCTCTGAACGACAAAGTAGAAGGTTGAGGAATCTATCCTCAGGCAATATGGATTGGGCCCCAACATCTAGATATGACCAAAATTATCTTCCACATAATCTGAGCTATGAATGCGATTATAATGAAGGCTTATATGCTGGTGTACAATTTCAAGGTGGGCCGGAGTCAGTTTCATCGACAGAAGACCTTCCTGCTGGTGCTGACATGCAGGCGCCTCCCGAGATGGTTCCTCCAAAGAGTAATGATGCTTGGACTACAGTTCGCATTGAAAAGTCTCTTCTGGATAAGACTAAACTGAAATTGGTTTTGGGCCTTTCTTTTGTTGTACTTGCAATGGTTGCTCCTCTACTTTGGATCAACATTCAAGATGATCGTTATCTTGTTCCTACTTAA 2010 0.4274 MSFWALESLAPTVRNIRVQRLFALSHSVCYGLLNLSLHNQQCFIGDMIACDNNENALNGFLPSAAEVRVHLIQAMISWPQERNRAEVEPLSFNLRTKGLVNHHRVGLIFSVHLNPLLILGPAMERNLSPILRQEIENLEKDAECRKSAIEALQAYVKDLDFKNIPIFLNQISEIKETCSLSGEFIISLYEVLARVHGVKIVPMVDKIMESIVQNLASSEGSFPLRQACSRVVSAIARYSIEPTTPEDKKRHVICSLCKPLSDSLSSSQECLTSGAALCLNALVDSDNWRFVSDETVSRICQNVAVALDGKPNHCNSHTGLVMALAKRNALIVEAYARLLIQAGLIILNAGHEEGNSLRRLSAIQMLNSLIKFLDPRSVFSELQLIIEAMEKCQSDTMAYVRAAAFEVLQAAEEIAFGKKSTYANSHDSIVGSSLSRSEGEDVSGDEDRSPASISPEPHIKGYFPGYHSIVESPILTNQASRQNLNNEHRSLKPKHGVLRSNTKSPQRSRAHATPDSVRIFATPTKHIHSLQYPSDVNLSCSERQSRRLRNLSSGNMDWAPTSRYDQNYLPHNLSYECDYNEGLYAGVQFQGGPESVSSTEDLPAGADMQAPPEMVPPKSNDAWTTVRIEKSLLDKTKLKLVLGLSFVVLAMVAPLLWINIQDDRYLVPT 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0678 669 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 125 534 IPR033337 GO:0005874|GO:0008017
Lele05g0678 669 MobiDBLite consensus disorder prediction 497 511 - -
Lele05g0678 669 Gene3D - 123 420 IPR011989 -
Lele05g0678 669 SUPERFAMILY ARM repeat 129 409 IPR016024 -
Lele05g0678 669 MobiDBLite consensus disorder prediction 427 457 - -
Lele05g0678 669 MobiDBLite consensus disorder prediction 439 453 - -
Lele05g0678 669 MobiDBLite consensus disorder prediction 488 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0678 Lele-ChrLele05 4005229 4011441 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0678 05 4005229 4011441 Lele13g1334 13 23323299 23325217 CCT
Lele05g0678 05 4005229 4011441 Lele14g1239 14 21641592 21649221 CCT
Lele05g0678 05 4005229 4011441 Lele15g1110 15 6435539 6440063 CCT
Lele05g0678 05 4005229 4011441 Lele16g1141 16 6401908 6403817 CCT
Lele05g0678 05 4005229 4011441 Lele05g0678 05 4005229 4011441 ECH
Lele05g0678 05 4005229 4011441 Lele07g0714 07 4045456 4051654 hybridization
Lele05g0678 05 4005229 4011441 Lele08g0511 08 3113023 3117547 hybridization