Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0503 ATGGCAATTTCACGAACAGGAGTATACGTTTACGACTATTTGGAGTATGCAAGCACATTGGCTGCTGAACTCCAGAGATTGTTAAACACTATCAGGGAACTCGATGAAAGATCCCAATCATTGATAAACCAGACCAGGCAACGCACTAGATATTGCTTAGGGTTGTCTTCACATGGCTCTAAGAAGGTTAATCATAATGGTATCCATAGCTATAATAACATTAACATTGGCGAAGACGATGATGCAACAATTGAGAAAATGCATAAAGAAATCGAGTCTAATCAGGATAGTGCTTTATCTCTATGTACCGAGAAGGTTTTGTTGGCAAAGCAAGCATATGACCTGATAGATAGCCATATAAAACGACTTGATGAGGATTTGAACAACTTTTCTGAAGACCTAAAGCAAGAAGGCAAAATACCACCAGATGAACCAGCTATTCTCCCCCCTTTGCCTATAGTCCTAAAAAGTGAAAAACGCAGATCCTTATATAGAACACCTCGATCAAAGAGACTTGATTACAGGGATAGAGATTGGGATTGGGAGCGTGATAGAGATTTTGAACTCATGCCCCCACCAGGAAGCCATAAGAAGGAGTATGGAACTTCCATGGATATTGATCAACCGATTGATCCGAATGAACCTACATACTGTATCTGTCATCAGGTTTCTTATGGAGATATGATCGCCTGTGACAATAATGAAAATTGCCCAGGAGGTGAATGGTTCCATTATTTGTGTGTTGGCCTAACTCCGGAAACGAGATTCAAGGGAAAGTGGTATTGTCCTACTTGCCGACCCCACTTTCAATGTTAA 816 0.4069 MAISRTGVYVYDYLEYASTLAAELQRLLNTIRELDERSQSLINQTRQRTRYCLGLSSHGSKKVNHNGIHSYNNINIGEDDDATIEKMHKEIESNQDSALSLCTEKVLLAKQAYDLIDSHIKRLDEDLNNFSEDLKQEGKIPPDEPAILPPLPIVLKSEKRRSLYRTPRSKRLDYRDRDWDWERDRDFELMPPPGSHKKEYGTSMDIDQPIDPNEPTYCICHQVSYGDMIACDNNENCPGGEWFHYLCVGLTPETRFKGKWYCPTCRPHFQC 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0503 271 FunFam PHD finger protein ING 209 268 - -
Lele06g0503 271 Coils Coil 17 44 - -
Lele06g0503 271 ProSiteProfiles Zinc finger PHD-type profile. 215 268 IPR019787 -
Lele06g0503 271 CDD PHD_ING 217 265 - -
Lele06g0503 271 Gene3D - 5 128 - -
Lele06g0503 271 Pfam Inhibitor of growth proteins N-terminal histone-binding 9 130 IPR024610 -
Lele06g0503 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 209 268 IPR013083 -
Lele06g0503 271 CDD ING_plant 17 127 - -
Lele06g0503 271 SMART PHD_3 217 266 IPR001965 -
Lele06g0503 271 SMART ING_2 9 130 IPR024610 -
Lele06g0503 271 PANTHER INHIBITOR OF GROWTH PROTEIN 2 266 IPR028651 -
Lele06g0503 271 SUPERFAMILY FYVE/PHD zinc finger 193 267 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0503 Lele-ChrLele06 3057560 3060948 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0503 06 3057560 3060948 Lele13g1334 13 23323299 23325217 CCT
Lele06g0503 06 3057560 3060948 Lele14g1239 14 21641592 21649221 CCT
Lele06g0503 06 3057560 3060948 Lele15g1110 15 6435539 6440063 CCT
Lele06g0503 06 3057560 3060948 Lele16g1141 16 6401908 6403817 CCT
Lele06g0503 06 3057560 3060948 Lele06g0503 06 3057560 3060948 ECH