Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0987 ATGGATGTGAGCAATGAGGCTAGTGTTGACCCCTTTTCGATTGGGCCATCGAGCATTATTGGTCGAACAATTGCTTTCAGAGTTCTTTTCTGCAAGTCCATGTCGCATTTGAGACATCAAATATTCAGTGTATTGTTAAATTTCATAAATAGGTTTAGGGGATTTTGGGCACCCGTTATAACATGGTTGCATCCGAGAAATCCACAGGGGATATTATTAATGATGACAATGATTGCTTTTTTCTTGAGACGATATACAAATGTGAAGGCAACGGCTGAAATGGCATATCGTAGGAAATTTTGGAGAAATATGATGAGAGCTGCATTGACCTACGAGGAGTGGGCTCACGCGGCTAAGATGCTTGATAAAGAGACTCCAAAGATGAATGGATCGGAATTTTACGACGTAGAATTAGTGAGGAGTAAGCTGCAAGAGCTCCGCCACCGTCGGCAAGAGGGATCTCTTAGAGACATAATGTTTTGTATGCGTGCTGATCTTGTGAGAAATCTAGGTAATATGTGTAACCCCGAGCTTCACAAAGATAGGCTTCAGGTGCCCAAATTAATCAAGGAGTATATTGATGAGGTATCGACTCAGTTGAGAATGGTCTGTGACTCTGATTCGGAGGAGCTCTCATTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGACACGCATTTGGGAGGACTGCTTTGCTGTTGAGTGGAGGAGCCTCTCTTGGAGCTTTTCATGTTGGTGTAGTTAAAACACTGGTAGAGCATAAACTCTTGCCTAGAATAATTGCTGGTTCAAGTGTAGGCTCCATTATGTGTTCCATTGTTGCTACTCGGTCTTGGCCTGAACTTCAAAGCTTTTTTGAACATTCTTGGCACTCATTACAGTTTTTTGATCAAATGGGCGGGATTTTTACAGTTGTGAAGAGGATCATGACTCGAGGTGCTGTTCATGAGATCAGACAATTGCAAATGATGTTAAGGCACCTGACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACAGGTCGAATTCTTGGGATAACAGTTTGCTCCCCAAGAAGACATGAACCACCTAGATGTCTTAACTACTTGACTTCACCCAATGTTGTTATATGGAGCGCGGTCACTGCTTCTTGTGCTTTTCCTGGCCTTTTTGAGGCTCAGGAACTAATGGCAAAGGATAGAAGTGGAGAGATTATTCCTTACCATCCTCCATTTAATTTGGGCCCTGAGGAAGGGTCTACGCCCATACGTCGCTGGAGGGATGGGAGCCTGGAGATTGATCTACCTATGATGCAGCTAAAAGAGCTGTTTAATGTCAATCACTTTATTGTCAGTCAGGCCAACCCTCATATTTCACCATTGTTAAGATTGAAAGACTTTGTAAGAGCTTATGGAGGTAATTTTGCTGCCAAGCTTGCTCATCTCGCTGAGATGGAGGTGAAACATAGATGTAATCAGGTACTAGAACTTGGCTTTCCATTAGGCGGACTTGCAAAGCTATTTGCTCAAGACTGGGAGGGTGATGTAACTGTTGTTATGCCCGCAACTATTGCTCAGTACTCAAAAATTATACAAAACCCTTCTTATGCGGAGCTTCAAAAGGCGGCCAACCAAGGGAGAAGGTGCACCTGGGAGAAGCTTTCGGCTGTAAAAGCAAATTGTGGCATTGAGCATGCTCTTGATGAAAGTGTTGCTATTCTCAATCATATGAGAAGACTCAAGAGAAGTTCTGAAAGAGCAGCTGCTTCTTCTCTTGGCCTGACCAGTTCTGTCAAATTCAATGCTTCAAGAAGAATCCCCTCGTGGAATTGCATTGCACGAGAGAATTCAACAAGTTCCTTTGAGGAAGACCTATCTGCGGGTAAAAATTGGAAAACCCACCATCCCATACATGATGGAAGTGACAGTGAATCGGAGAGTGTCAGTTTGAATTCTTGGACACGATCTGGTGGCCCCTTGATGAGAACTACTTCAGCAAATATGTTCATTGACTTTGTCCAAAACTTAGATATTGATACTGACCCAAAGAAAGGCATGGTAGCTCATCTGAACTCTCAAGTTTTTCAGCATAATCACAGTCCAAGGGTCAACACTCCCAATAGGAGCTCCGAGGACATAGAAATTGATCAAGAAACTGACCATAGGTTAGTCATGAATGGATCTAGCATAATGGTAACTGAAGGTGATCTTTTGCAGCCAGAAAGAATCCAAAATGGGATTTTGTTCAATGTTGTCAAGAAAGAAGACTTGACAACTTTGAATAGGAACCATGATTCTGAAAATTACAACAATGAAGTTTCTGAATGTTTGCAAATTGACTGTCCAGGAAATGATATGGATGCTGCCAGCGCAACTTCTGACTGGGGAGATGATGATTCCGCTGCTACTAAGTCCCCAAGGGAAACCCCCTGA 2415 0.4269 MDVSNEASVDPFSIGPSSIIGRTIAFRVLFCKSMSHLRHQIFSVLLNFINRFRGFWAPVITWLHPRNPQGILLMMTMIAFFLRRYTNVKATAEMAYRRKFWRNMMRAALTYEEWAHAAKMLDKETPKMNGSEFYDVELVRSKLQELRHRRQEGSLRDIMFCMRADLVRNLGNMCNPELHKDRLQVPKLIKEYIDEVSTQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLLPRIIAGSSVGSIMCSIVATRSWPELQSFFEHSWHSLQFFDQMGGIFTVVKRIMTRGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRRHEPPRCLNYLTSPNVVIWSAVTASCAFPGLFEAQELMAKDRSGEIIPYHPPFNLGPEEGSTPIRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHISPLLRLKDFVRAYGGNFAAKLAHLAEMEVKHRCNQVLELGFPLGGLAKLFAQDWEGDVTVVMPATIAQYSKIIQNPSYAELQKAANQGRRCTWEKLSAVKANCGIEHALDESVAILNHMRRLKRSSERAAASSLGLTSSVKFNASRRIPSWNCIARENSTSSFEEDLSAGKNWKTHHPIHDGSDSESESVSLNSWTRSGGPLMRTTSANMFIDFVQNLDIDTDPKKGMVAHLNSQVFQHNHSPRVNTPNRSSEDIEIDQETDHRLVMNGSSIMVTEGDLLQPERIQNGILFNVVKKEDLTTLNRNHDSENYNNEVSECLQIDCPGNDMDAASATSDWGDDDSAATKSPRETP 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0987 804 MobiDBLite consensus disorder prediction 775 804 - -
Lele16g0987 804 Pfam Domain of unknown function (DUF3336) 94 225 IPR021771 GO:0004806|GO:0006629
Lele16g0987 804 CDD Pat_SDP1-like 162 569 - -
Lele16g0987 804 Gene3D Cytosolic phospholipase A2 catalytic domain 229 309 - -
Lele16g0987 804 Gene3D Cytosolic phospholipase A2 catalytic domain 310 491 - -
Lele16g0987 804 SUPERFAMILY FabD/lysophospholipase-like 228 572 IPR016035 -
Lele16g0987 804 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 232 435 IPR002641 GO:0006629
Lele16g0987 804 MobiDBLite consensus disorder prediction 626 646 - -
Lele16g0987 804 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 55 570 - -
Lele16g0987 804 Pfam Patatin-like phospholipase 232 423 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0987 Lele-ChrLele16 5571039 5574332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0987 1 786 Acyl Lipid Metabolism Gene Families AT5G04040 75.000 0.0 1213
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0682 06 4156542 4157204 Lele16g0987 16 5571039 5574332 CCT
Lele07g0872 07 5117006 5117668 Lele16g0987 16 5571039 5574332 CCT
Lele08g0679 08 4188358 4189020 Lele16g0987 16 5571039 5574332 CCT
Lele13g1460 13 24099384 24102702 Lele16g0987 16 5571039 5574332 hybridization
Lele14g1385 14 22489183 22496349 Lele16g0987 16 5571039 5574332 hybridization