Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1385 ATGGATGTGAGCAATGAGGCTAGTGTTGACCCCTTTTCGATTGGGCCATCGAGCATTATTGGTCGAACAATTGCTTTCAGAGTTCTTTTCTGCAAGTCCATGTCGCATTTGAGACATCAAATATTCAGTGTATTGTTAAATTTCATAAATAGGTTTAGGGGATTTTGGGCACCCGTTATAACATGGTTGCATCCGAGAAATCCACAGGGGATATTATTAATGATGACAATGATTGCTTTTTTCTTGAGACGATATACGAATGTGAAGGCAACGGCTGAAATGGCATATCGTAGGAAATTTTGGAGAAATATGATGAGAGCTGCATTGACCTACGAGGAGTGGGCTCACGCGGCTAAGATGCTTGATAAAGAGACTCCAAAGATGAATGGATCGGAATTTTACGACGTAGAATTAGTGAGGAGTAAGCTGCAAGAGCTCCGCCACCGTCGGCAAGAGGGATCTCTTAGAGACATAATGTTTTGTATGCGTGCTGATCTTGTGAGAAATCTAGGTAATATGTGTAACCCCGAGCTTCACAAAGATAGGCTTCAGGTGCCCAAATTAATCAAGGAGTATATTGATGAGGTATCGACTCAGTTGAGAATGGTCTGTGACTCTGATTCGGAGGAGCTCTCATTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGACACGCATTTGGGAGGACTGCTTTGCTGTTGAGTGGAGGAGCCTCTCTTGGAGCTTTTCATGTTGGTGTAGTTAAAACACTGGTAGAGCATAAACTCTTGCCTAGAATAATTGCTGGTTCAAGTGTAGGCTCCATTATGTGTTCCGTTGTTGCTACTCGGTCTTGGCCTGAACTTCAAAGCTTTTTTGAACATTCTTGGCACTCATTACAGTTTTTTGATCAAATGGGCGGGATTTTTACAGTTGTGAAGAGGATCATGACACGAGGTGCTGTTCATGAGATCAGACAATTGCAAATGATGTTAAGGCACCTGACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACAGGTCGAATTCTTGGGATAACAGTTTGCTCCCCAAGAAGACATGAACCACCTAGATGTCTTAACTACTTGACTTCACCCAATGTTGTTATATGGAGCGCTGTCACTGCTTCTTGTGCTTTTCCTGGCCTTTTTGAGGCTCAGGAACTAATGGCAAAGGATAGAAGTGGAGAGATTATTCCTTACCATCCTCCATTTAATTTGGGCCCTGAGGAAGGGTCTACGCCCATACGACGCTGGAGGGATGGGAGCCTGGAGATTGATCTACCTATGATGCAGCTAAAAGAGCTGTTTAATGTCAATCACTTTATTGTCAGTCAGGCCAATCCCCATATTTCACCATTGTTAAGATTGAAAGACTTTGTAAGAGCTTATGGAGGCAATTTTGCTGCCAAGCTTGCTCATCTCGCTGAGATGGAGGTGAAACATAGATGTAATCAGGTACTAGAACTTGGCTTTCCATTAGGAGGACTTGCAAAGCTATTTGCTCAAGACTGGGAGGGTGATGTAACTGTTGTTATGCCCGCAACTATTGCTCAGCATGTGCTGTCTTTTTTCCGATACCAGTACTCAAAAATTATACAAAACCCTTCTTATGCGGAGCTTCAAAAGGCGGCCAACCAAGGGAGAAGGTGCACCTGGGAGAAGCTTTCGGCTGTAAAAGCAAATTGTGGCATTGAGCATGCTCTTGATGAAAGTGTTGCTATTCTCAATCATATGAGAAGACTCAAGAGAAGCTCTGAAAGAGCAGCTGCTGCTTCTATTGGCCTGACCAGTTCTGTCAAATTCAATGCTTCAAGAAGAATCCCCTCGTGGAATTGCATTGCACGAGATAATTCAACAAGTTCCTTTGAGGAAGACCTATCTGCGGGTAAAAATTGGAAAACCCACCATCCCATACATGATGGAAGTGACAGTGAATCGGAGAGTGTCAGTTTGAATTCTTGGACACGATCTGGTGGCCCCTTGATGAGAACTACTTCAGCGAATATGCTCATTGACTTTGTCCAAAACTTAGATGTTGATACTGACCCCAAGAAAGGCATGGTAGCTCATCTGAACTCTCAAGTTTTTCAGCACAATCACATTCCAAGGGTCAACACTCCCGATAGGAGCTCCGAGGACATAGAAATTGATCAAGAAATTGACCATATGTTAGTCATGAATGGATCTAGCATAATGGTAACTGAAGGTGATCTTTTGCAGCCAGAAAGAATCCAAAATGGGATTTTGTTCAATGTTGTCAAGAAAGAAGACTTGACAACTTTGAATAGGAACCATGATTCTGAAAATTACCACAATGAAGTTTCTGAATGTTTGCAAATTGACTGTCCAGGAAATGAGATGGATGCTGCCAGCGCAACTTCTGACTGGGGAGATGATGATTCCGCGGCTACTAAGTCTCCAAGGGAAACCCCCTGTGTACGAACCCTTAGCTGTAAGCGTGTTCCAACAATTTATGCTGGGGAAGAAGCAAAAGAGTCAAAGTTTAGCGGAGTAACGAGAATTTCATCTGATGAATATGTTAATTGTGAAAATAATGGAAAGAACGATACTCGTGGTGGAATAGGAGCATAGCTGACTAAAAGCAGTGTTGGACTTGGACGGGTGCAGAAGTGTTTTTGGTACGGCGTTTCATTTTCGTTTCAGTTCATTGCAAAAAACAAAACCCCTCCCACCTTCCTCACTCTTTCTCCTCATTCCTCAACCGCCCTTTTTCTCTTTCTCCTCCTTCAGCGTCTTTCATGCTTCCCAATGAAGCTCACCACTATGAACCCCAAACGTCTTTTTCGATCCAAGAAGGATCGCTCCTCCTTGTCCAGATCCGGGCCCCCGTCCTTTGGCTCAGGAACCTCCTCCTCTTCATCTGACGGATCAACCATCCACAAGGCCCCGAGCGGCGTTGCCGGCTCATCCACCCCCACCAGCGTCTTGCCTGAATCCTCCTCTGATTGGACTGATGTCCACTGGGACATGGTTCATGCGTTCAAGCTCATAGACCGAGACAATGACGGGTTTGTCTGTAGGGAAGAGTTGGAATCGCTGCTGACCTGGCTTGGAACCGAGCCGCCGGGCCAGGAGGAGGTTACGATGATGCTTAGGGAGGTGGATCCCGACGGCAGAGGGTGCATCAGCGTGGAGGCACTGATGAGCAGGGTCGGTCCGGCATGCGAGCCGGGTTGCGATTTGGACGAGTTGAGAGAGGCCTTTGAAGTTTTCGATACGGATCACGACGGGAAAATCTCCGCGGAGGAGCTTATGCGAGTTTTCAAGGCCATAGGAGAGGAACGATGCACGTTGGATGACTGCCGGCGCATGATAGAAGGGGTTGATCGGAACGGGGATGGCTTTGTGTGCTTCGAGGACTTCTCCCGGATGATGGAGCCGCAGAGATGA 3417 0.456 MDVSNEASVDPFSIGPSSIIGRTIAFRVLFCKSMSHLRHQIFSVLLNFINRFRGFWAPVITWLHPRNPQGILLMMTMIAFFLRRYTNVKATAEMAYRRKFWRNMMRAALTYEEWAHAAKMLDKETPKMNGSEFYDVELVRSKLQELRHRRQEGSLRDIMFCMRADLVRNLGNMCNPELHKDRLQVPKLIKEYIDEVSTQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLLPRIIAGSSVGSIMCSVVATRSWPELQSFFEHSWHSLQFFDQMGGIFTVVKRIMTRGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRRHEPPRCLNYLTSPNVVIWSAVTASCAFPGLFEAQELMAKDRSGEIIPYHPPFNLGPEEGSTPIRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHISPLLRLKDFVRAYGGNFAAKLAHLAEMEVKHRCNQVLELGFPLGGLAKLFAQDWEGDVTVVMPATIAQHVLSFFRYQYSKIIQNPSYAELQKAANQGRRCTWEKLSAVKANCGIEHALDESVAILNHMRRLKRSSERAAAASIGLTSSVKFNASRRIPSWNCIARDNSTSSFEEDLSAGKNWKTHHPIHDGSDSESESVSLNSWTRSGGPLMRTTSANMLIDFVQNLDVDTDPKKGMVAHLNSQVFQHNHIPRVNTPDRSSEDIEIDQEIDHMLVMNGSSIMVTEGDLLQPERIQNGILFNVVKKEDLTTLNRNHDSENYHNEVSECLQIDCPGNEMDAASATSDWGDDDSAATKSPRETPCVRTLSCKRVPTIYAGEEAKESKFSGVTRISSDEYVNCENNGKNDTRGGIGAXLTKSSVGLGRVQKCFWYGVSFSFQFIAKNKTPPTFLTLSPHSSTALFLFLLLQRLSCFPMKLTTMNPKRLFRSKKDRSSLSRSGPPSFGSGTSSSSSDGSTIHKAPSGVAGSSTPTSVLPESSSDWTDVHWDMVHAFKLIDRDNDGFVCREELESLLTWLGTEPPGQEEVTMMLREVDPDGRGCISVEALMSRVGPACEPGCDLDELREAFEVFDTDHDGKISAEELMRVFKAIGEERCTLDDCRRMIEGVDRNGDGFVCFEDFSRMMEPQR 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1385 1138 Pfam Patatin-like phospholipase 232 423 IPR002641 GO:0006629
Lele14g1385 1138 MobiDBLite consensus disorder prediction 634 655 - -
Lele14g1385 1138 CDD Pat_SDP1-like 162 578 - -
Lele14g1385 1138 SUPERFAMILY EF-hand 998 1134 IPR011992 -
Lele14g1385 1138 MobiDBLite consensus disorder prediction 939 987 - -
Lele14g1385 1138 FunFam Probable calcium-binding protein CML35 1056 1138 - -
Lele14g1385 1138 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 55 579 - -
Lele14g1385 1138 ProSitePatterns EF-hand calcium-binding domain. 1007 1019 IPR018247 -
Lele14g1385 1138 Pfam EF-hand domain pair 1071 1134 IPR002048 GO:0005509
Lele14g1385 1138 Pfam EF-hand domain pair 1001 1054 IPR002048 GO:0005509
Lele14g1385 1138 Gene3D - 1065 1138 - -
Lele14g1385 1138 ProSiteProfiles EF-hand calcium-binding domain profile. 1068 1103 IPR002048 GO:0005509
Lele14g1385 1138 ProSitePatterns EF-hand calcium-binding domain. 1081 1093 IPR018247 -
Lele14g1385 1138 MobiDBLite consensus disorder prediction 790 810 - -
Lele14g1385 1138 SMART efh_1 1035 1063 IPR002048 GO:0005509
Lele14g1385 1138 SMART efh_1 1109 1137 IPR002048 GO:0005509
Lele14g1385 1138 SMART efh_1 1072 1100 IPR002048 GO:0005509
Lele14g1385 1138 SMART efh_1 998 1026 IPR002048 GO:0005509
Lele14g1385 1138 ProSiteProfiles EF-hand calcium-binding domain profile. 1105 1138 IPR002048 GO:0005509
Lele14g1385 1138 CDD EFh 1072 1134 IPR002048 GO:0005509
Lele14g1385 1138 Gene3D - 993 1064 - -
Lele14g1385 1138 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 232 435 IPR002641 GO:0006629
Lele14g1385 1138 ProSiteProfiles EF-hand calcium-binding domain profile. 1002 1029 IPR002048 GO:0005509
Lele14g1385 1138 Pfam Domain of unknown function (DUF3336) 94 225 IPR021771 GO:0004806|GO:0006629
Lele14g1385 1138 MobiDBLite consensus disorder prediction 946 987 - -
Lele14g1385 1138 CDD EFh 1001 1054 IPR002048 GO:0005509
Lele14g1385 1138 ProSitePatterns EF-hand calcium-binding domain. 1118 1130 IPR018247 -
Lele14g1385 1138 Gene3D Cytosolic phospholipase A2 catalytic domain 220 446 - -
Lele14g1385 1138 SUPERFAMILY FabD/lysophospholipase-like 228 581 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1385 Lele-ChrLele14 22489183 22496349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g1385 1 795 Acyl Lipid Metabolism Gene Families AT5G04040 73.449 0.0 1197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0682 06 4156542 4157204 Lele14g1385 14 22489183 22496349 CCT
Lele07g0872 07 5117006 5117668 Lele14g1385 14 22489183 22496349 CCT
Lele08g0679 08 4188358 4189020 Lele14g1385 14 22489183 22496349 CCT
Lele14g1385 14 22489183 22496349 Lele15g0965 15 5628019 5628561 hybridization
Lele14g1385 14 22489183 22496349 Lele16g0987 16 5571039 5574332 hybridization