Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1460 ATGGATGCGAGCAATGAAGCTAGTGTTGACCCCTTTTCAATTGGTCCATCGAGCATTATTGGTCGAACAATTGCTTTCAGAGTTCTTTTCTGCAAGTCCATGTCGAATTTGAGACATCAAATATGCAGTGTATTGTTAAATATCATAGATAGGTTTAGGGGATTTTGGGCACCCGTTATAACCTGGTTGCATCCAAGAAATCCACAGGGGATATTATTAATGATGACAATGATTGCTTTTTTCTTGAGACGATATACAAATGTGAAGGCAACGGCTGAAATGGCATATCGTAGGAAATTTTGGAGAAATATGATGAGAACTGCATTTACCTATGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAACGAAACTCCAAAGATGAATGAATCGGAATTTTACGACGTAGAATTAGTGAGGAGTAAGTTGCAAGAGCTCCGTCACCGTCGACAAGAGGGATCTCTTAGAGACATAATTTTTTGTATGCGTGCTGATCTTGTTAGAAATCTAGGGCATATGTGTAACCCCGAGCTTCACAAAGATAGGCTTCAGGTGCCCAAATTAATCAAGGAGTATATTGATGAGGTATCGACTCAGTTGAGAATGGTCTGTGACTCTGATTCAGAGGAGCTCTCATTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGACACGCATTTGGGAGGACTGCTTTGCTGTTGAGTGGAGGAGCCTCTCTTGGAGCTTTTCATGTTGGTGTAGTTAAAACACTGGTAGAGCATAAACTCTTGCCTAGGATAATTGCGGGTTCAAGTGTAGGCTCCATTATGTGTTCCGTTGTTGCTACTCGGTCTTGGCCTGAACTTCAGAGCTTTTTTGAGCATTCTTGGCACTCATTACAGTTTTTTGATCAAATGGGTGGGATTTTTACAGTTGCGAAGAGGATAATGACACGAGGTGCTGTTCATGAGATCAGACAATTGCAGATGATGTTAAGGCACCTGACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACAGGTCGAATTCTTGGGATAACAGTTTGCTCCCCAAGAAGACATGAACCACCTAGATGTCTTAACTACTTGACCTCACCCAATGTTGTAATATGGAGCGCGGTCACTGCTTCTTGTGCTTTTCCTGGCCTTTTTGAGGCTCAGGAACTAATGGCAAAGGATAGAAGTGGAGAGATTATTCCTTACCATCCTCCATTTAATTTGGGCCCTGAGGAAGGGTCTACGCCCATACGTAGCTGGAGGGATGGTAGCCTGGAGATTGATCTACCTATGATGCAGCTAAAAGAGCTGTTTAATGTCAATCACTTTATTGTCAGTCAGGCCAATCCCCATATTTCACCATTGTTAAGATTGAAAGACTTTGTAAGAGCTTATGGAGGCAATTTTGCCGCCAAGCTTGCTCATCTCGCTGAGATGGAGGTGAAGCATAGATGTAATCAGGTACTAGAACTTGGCTTTCCATTAGGCGGACTTGCAAAGCTATTTGCTCAAGACTGGGAGGGTGATGTAACTGTTGTTATGCCCGCAACTATTGCTCAGTACTCAAAAATTATACAAAACCCTTCTTATACGGAGCTTCAAAAGGCGGCCAACCAAGGGAGAAGGTGCACCTGGGAGAAGCTTTCGGCTGTAAAAGCAAATTGTGGCATTGAGCTTGCTCTTGATGAATGTGTTGCTATTCTCAGTCGTATGAGAAGACTCAAGAGAAGTTCTGAAAGAGCAGCTGCTGCTTCTATTGGCCTGGCCAGTGCTGTCAAATTCAATGCTTCGAGAAGAATCCCCTCGTGGAATTGCATTGCACGAGAGAATTCAACAAGTTCCTTTGAGGAAGACCTACCAGATGTTGGTTCCTCTCTGCCTCACGGTGCTGCAGGTAAAAATGGGAAAACCCGCCATCCCATACATGATGGAAGTGACAACGAATCAGAGAGTGTCAGTTTGAGTTCTTGGACAAGATCTGGTGGCCCCTTGATGAGAACTAATTCAGCAAATATGTTCACTGACTTTGTCCAAAACTTAGATGTTGATACTGACCTAAAGAAAGGCATGGTAGCTCATCCGAACTCTCAAGTTTTTCAGCATAATCACAGTCCAAGGGTCAACACTCCCGATAGGAACTCTGAGGGCATAGAAATTGGTCAAGAATCTGACCATAGGTTAGTCATGAATGGATCTAGCATAATGGTAACTGAAGGTGATCTTTTGCAGCCAGAAAGAATCCAAAATGGGATTGTGTTCAATATTGTCAAGAAAGAAGACTTGACAACTTTGAATAGGAACCATGATTCTGAAAATTACAACAATGAAGTTGCTGAATGTCTGCAAATTGACTGTCCAGGAAATGAGATGGATGCCACCAGCGCAACTTCTGACTGGGGAGATGATGATTTCGCTGCTACAAAGTCCCCAAGGGAACCCAGAGAGTTTAATTGTGGGTACCATTCTAATGCAGATGCTGGTAAGGATCAGATCAGTGCTGACAATTGA 2508 0.4298 MDASNEASVDPFSIGPSSIIGRTIAFRVLFCKSMSNLRHQICSVLLNIIDRFRGFWAPVITWLHPRNPQGILLMMTMIAFFLRRYTNVKATAEMAYRRKFWRNMMRTAFTYEEWAHAAKMLDNETPKMNESEFYDVELVRSKLQELRHRRQEGSLRDIIFCMRADLVRNLGHMCNPELHKDRLQVPKLIKEYIDEVSTQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLLPRIIAGSSVGSIMCSVVATRSWPELQSFFEHSWHSLQFFDQMGGIFTVAKRIMTRGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRRHEPPRCLNYLTSPNVVIWSAVTASCAFPGLFEAQELMAKDRSGEIIPYHPPFNLGPEEGSTPIRSWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHISPLLRLKDFVRAYGGNFAAKLAHLAEMEVKHRCNQVLELGFPLGGLAKLFAQDWEGDVTVVMPATIAQYSKIIQNPSYTELQKAANQGRRCTWEKLSAVKANCGIELALDECVAILSRMRRLKRSSERAAAASIGLASAVKFNASRRIPSWNCIARENSTSSFEEDLPDVGSSLPHGAAGKNGKTRHPIHDGSDNESESVSLSSWTRSGGPLMRTNSANMFTDFVQNLDVDTDLKKGMVAHPNSQVFQHNHSPRVNTPDRNSEGIEIGQESDHRLVMNGSSIMVTEGDLLQPERIQNGIVFNIVKKEDLTTLNRNHDSENYNNEVAECLQIDCPGNEMDATSATSDWGDDDFAATKSPREPREFNCGYHSNADAGKDQISADN 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1460 835 Pfam Patatin-like phospholipase 232 407 IPR002641 GO:0006629
Lele13g1460 835 Pfam Domain of unknown function (DUF3336) 94 225 IPR021771 GO:0004806|GO:0006629
Lele13g1460 835 CDD Pat_SDP1-like 162 568 - -
Lele13g1460 835 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 232 435 IPR002641 GO:0006629
Lele13g1460 835 SUPERFAMILY FabD/lysophospholipase-like 228 571 IPR016035 -
Lele13g1460 835 MobiDBLite consensus disorder prediction 614 660 - -
Lele13g1460 835 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 48 569 - -
Lele13g1460 835 MobiDBLite consensus disorder prediction 792 835 - -
Lele13g1460 835 Gene3D Cytosolic phospholipase A2 catalytic domain 220 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1460 Lele-ChrLele13 24099384 24102702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1460 1 796 Acyl Lipid Metabolism Gene Families AT5G04040 73.665 0.0 1204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0682 06 4156542 4157204 Lele13g1460 13 24099384 24102702 CCT
Lele07g0872 07 5117006 5117668 Lele13g1460 13 24099384 24102702 CCT
Lele08g0679 08 4188358 4189020 Lele13g1460 13 24099384 24102702 CCT
Lele13g1460 13 24099384 24102702 Lele15g0965 15 5628019 5628561 hybridization
Lele13g1460 13 24099384 24102702 Lele16g0987 16 5571039 5574332 hybridization