Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0478 ATGGCCGCTTCAATCTCCAGCGTTGCCATTCCCTTGTCCAGGCTCCAACCCCAGGCTGACTTCCCAGCCTACTACAAATCCCCATCACCGATATCCCTCGCCTGTAACAAGTCTCTATTTATAGCCACCGAATTAAATACAAGAAAATCTACTATATGCAAGGTCCTGTCCGAATCCAACTCGTCCTTGTCGTCAATGATCCCCGAGCTCGAGAGAGAACGAGTACGAGTACGAGTAGACGCAGACGAAGAACAACCAGTTGACCGCTCGACGCGTCCCAAAGAATCATGCGAAGCGGGATTAGCTGATGTCTGGCGCGACATCCATGGCGAAAACGACTGGGTTGGGCTTCTTGATCCCATGAACCCACTTCTACGCTCGGAACTGATTCGCTACGGTGAAATGGCTCAAGCCTGCTACGACGCTTTCGATTACGACCCCTTTTCCAAGTACTGCGGAAGCTGCCGATTCACCCGTTGCAAGTTCTTCGAGTCCTTGGTTATGACGCAACTCGGCTACGACGTCACGCGCTACCTCTACGCCACCGCCCACATCGACCTCCCCAACTTCTTCAAGCAGTCCCGATGGCCCAGAATGTGGAGCAACAGCGCTAACTGGGCAGGATACGTCGCCGCCTCCGACGACCAAACCACCAAACGACTTGGCCGCAGAGACATAACAATTGCGTGGAGAGGAACGGTGACCCGGTTGGAATGGATCGCGGACATGATGGATTTCCTCAAACCCATCTGCTCCAACAATATCCCCTGCCCGGACCAATCCGTGAAAGTCGAATCTGGTTTTGTGGATCTTTACACCTCGAAGGACGGCGCATGCCGGTTCTGCCAATATTCGGCGAGGGAGCAGATCTTGACTGAGGTAAAGCGTTTACTGGAAATGTACAGAGACGAGGAACTGAGCATAACGATCACGGGGCACAGCTTGGGGAGCGCGTTGGCTATATTGAGCGCTTACGACATAGTGGAAACGGGTTTGAACGTGAAGAAGGATGGTAGAGAAGTGCTGGTTTCGGTGTTTTCATTTTCGGGTCCGAGAGTGGGGAACGTGAGGTTCAAGGAGAGATTGGAGTGGCTGGGAGTGAAGGTTCTGAGGGTGTTTAATGGGCACGATATTGTGCCCAGGTCACCTGGGTTTCTGTTCAACGAGCAGGTGCCGTCGACGTTGATGAAGTTGGCCGAGGCTTTGCCATGGAGCTATTCACACGTTGGGGTGGAGTTGCAGTTGGACCACCACAACTCGCCGTTTCTCAAGCCCACCAACGATCCTGTTTGTGCCCATAACTTAGAGGCTCTCTTGCATTTGCTTGACGGATACCACGGAAGAGGGGAGAGATTTGTGCTAGCGAGTGGGAGGGACCCTGCACTGGTGAACAAAGCATGCGACTTCTTGAAAGATCATTACTTGGTGCCGCCATGCTGGAGGCAAGACGAGAACAAGGGCATGATCCAGAACAGGGATGGACGCTGGGTGCAGCCTGAACGCCCTAACCTCGACGATCATCCCAACGATATTCGTCTTCATCTCTTCCAATTAGGCCTTGCTTCCTCTGATATTTAA 1578 0.5285 MAASISSVAIPLSRLQPQADFPAYYKSPSPISLACNKSLFIATELNTRKSTICKVLSESNSSLSSMIPELERERVRVRVDADEEQPVDRSTRPKESCEAGLADVWRDIHGENDWVGLLDPMNPLLRSELIRYGEMAQACYDAFDYDPFSKYCGSCRFTRCKFFESLVMTQLGYDVTRYLYATAHIDLPNFFKQSRWPRMWSNSANWAGYVAASDDQTTKRLGRRDITIAWRGTVTRLEWIADMMDFLKPICSNNIPCPDQSVKVESGFVDLYTSKDGACRFCQYSAREQILTEVKRLLEMYRDEELSITITGHSLGSALAILSAYDIVETGLNVKKDGREVLVSVFSFSGPRVGNVRFKERLEWLGVKVLRVFNGHDIVPRSPGFLFNEQVPSTLMKLAEALPWSYSHVGVELQLDHHNSPFLKPTNDPVCAHNLEALLHLLDGYHGRGERFVLASGRDPALVNKACDFLKDHYLVPPCWRQDENKGMIQNRDGRWVQPERPNLDDHPNDIRLHLFQLGLASSDI 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0478 525 FunFam Phospholipase A1-II 3 104 508 - -
Lele16g0478 525 Gene3D alpha/beta hydrolase 104 511 IPR029058 -
Lele16g0478 525 SUPERFAMILY alpha/beta-Hydrolases 127 446 IPR029058 -
Lele16g0478 525 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 78 502 - -
Lele16g0478 525 CDD Lipase_3 161 419 - -
Lele16g0478 525 Pfam Lipase (class 3) 228 385 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0478 Lele-ChrLele16 2618238 2620395 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g0478 89 520 Acyl Lipid Metabolism Gene Families AT2G30550 66.362 0.0 617
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1285 06 8192004 8196193 Lele16g0478 16 2618238 2620395 CCT
Lele07g1487 07 9073186 9077512 Lele16g0478 16 2618238 2620395 CCT
Lele08g1281 08 8149149 8153356 Lele16g0478 16 2618238 2620395 CCT
Lele13g1954 13 27064711 27066898 Lele16g0478 16 2618238 2620395 hybridization
Lele14g1883 14 25391982 25394171 Lele16g0478 16 2618238 2620395 hybridization